CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3A2_RAT (Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20
Identity = 53/155 (34.19%), Postives = 87/155 (56.13%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L++ +  L+ H D Q++ ++E+     +  P  Y  +  ++ + M+L E LRLYP    L R   K+ +L  L +P G  + +P   +H DP+ W     EF PERF++  +K + +   Y PF +GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  315 LSFVLYFLATHPDIQKKLQEEIDGALPSKAPPTYDIVMEMEYLDMVLNETLRLYPIGNRLERVCKKDIELDGLFIPKGSVVTIPTYALHHDPQHW-PKPEEFHPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ 467          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP56_YEAST (Cytochrome P450-DIT2 OS=Saccharomyces cerevisiae GN=DIT2 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.760e-20
Identity = 62/181 (34.25%), Postives = 95/181 (52.49%), Query Frame = -1
Query:  299 LLNWTMVLLSKHQ-DWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPL-TALSRAVLKETKLG-NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGIS------KAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHP 814
            L N ++ LL+K+  +WQE+ R+EV     N   D   L  L ++   L+EV+R+YPPL T ++R   K  KLG  + +P GV +G        DP+ WG  A +FKPER+   I       + AKN+ +   F  G R C+G+  AL E +++ A +L+ + + L P +    T    L P
Sbjct:  301 LFNSSLYLLAKYSNEWQEKLRKEV-----NGITDPKGLADLPLLNAFLFEVVRMYPPLSTIINRCTTKTCKLGAEIVIPKGVYVGYNNFGTSHDPKTWGTTADDFKPERWGSDIETIRKNWRMAKNRCAVTGFHGGRRACLGEKLALTEMRISLAEMLKQFRWSLDPEWEEKLTPAGPLCP 476          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.760e-20
Identity = 58/180 (32.22%), Postives = 102/180 (56.67%), Query Frame = -1
Query:  266 WTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 805
            + + LLSK+ D Q+RA +E  ++ G  K        +  ++ ++ E LR+YP +   SR VL++ ++G LT+P G  I   + ++H+DP+ +  D   F P+RF   +++   +  ++  F++GPR C+GQ FA++E K + AM+L++Y F   P   H P  +  L  + G  + LR L
Sbjct:  318 FALSLLSKNPDVQQRAFEEASELEGREKES------MPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNF-PDPERFDPDRFL--VNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF--LPDKDHQPKPLAELVTKSGNGIRLRIL 486          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.760e-20
Identity = 52/155 (33.55%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L++ M  L+ H D Q++ ++E+  V  N  P  Y  +  ++ + M++ E LRL+P    L R   K+ ++  + +P GV + +P   +H DP+ W  +  +F PERF++  +K   +   Y PF +GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  314 LSFIMYELATHPDVQQKLQEEIDAVLPNKAPATYDTVLQMEYLDMVVNETLRLFPLAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYW-TEPEKFLPERFSKN-NKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP343_HUMAN (Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.760e-20
Identity = 51/155 (32.90%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L + M  L+ H D Q++ ++E+  V  N  P  Y  L  ++ + M++ E LRL+P ++ ++R   K+ ++  + +P G+ + +P+  +H DP+ W  +  +F PERF++  +K + +   Y PF +GPR C+G  FAL   K+A    LQN+SF+
Sbjct:  314 LPFIMYELATHPDVQQKLQEEIDAVLPNKAPVTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYW-TEPEKFCPERFSKK-NKDSIDLYRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSFK 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AA_MESAU (Lithocholate 6-beta-hydroxylase OS=Mesocricetus auratus GN=CYP3A10 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.523e-20
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = -1
Query:  350 LSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 790
            L+ H D Q++   E+     N  P  Y  L  ++ + M++ E LRLYP    L R   K  ++  L +P G+ + +P   +H+DPE W  +  EF+PERF++  +K + +   Y PF +GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  321 LATHPDVQKKLHDEIDSALPNKAPVTYDVLMGMEYLDMVINEGLRLYPIANRLERISKKAVEINGLFIPKGITVMVPTYPLHRDPEYW-PEPEEFRPERFSKE-NKGSIDPYVYMPFGNGPRNCIGMRFALLSMKLAVVSVLQNFTLQ 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.523e-20
Identity = 55/160 (34.38%), Postives = 88/160 (55.00%), Query Frame = -1
Query:  335 MVLLSKHQDWQERARQEVLQVF---GNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSY 799
            + LL+ H + QE   +E+  VF   G+    Y ++  L  ++ ++ E LRL P +   +R    + +L N + +P GV IG+ M   H++PE+WG DA  F P+ F AE + +  K+  +Y PFA G R C+G  +A++ +K A   IL+NY    S  Y
Sbjct:  310 LFLLANHPEHQEAVFEELNGVFPDAGHFGITYPDMQKLDYLERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQ--KHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLY 467          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F3_RAT (Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus norvegicus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20
Identity = 54/155 (34.84%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  359 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 811
            L+W +  L+KH ++QER RQEV ++  + +P+   + +L  L  + M + E LRL+PP TA+SR   ++  L +   +P GV   + +   H +P +W D  V + P RF     K  ++ +++ PF++GPR C+GQ FA+ E K+A A+ L  +
Sbjct:  337 LSWILYNLAKHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDPEV-YNPFRFDADNGKG-RSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AL_PIG (Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus scrofa GN=CYP4A21 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20
Identity = 56/184 (30.43%), Postives = 99/184 (53.80%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W +  L+ + + Q+R R+E+  + G+     +  L+ +    M + E LRLYPP+ ++ R + K  T     +LPAG+ + L +  +H +P++W +   EF P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+  A+ L  +     PS +  P     L  + G  L LRK+
Sbjct:  324 ISWVLYALASNPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPSVGRELSKPITFPDGRSLPAGIILSLSIYGLHHNPQVWPNPE-EFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMKVVVALTLLRFELAPDPSRIPVPIQGIVLKSKNGIHLNLRKI 503          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.283e-19
Identity = 53/165 (32.12%), Postives = 88/165 (53.33%), Query Frame = -1
Query:  305 LSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTL 790
            ++ H + Q++  +E+  V GN+K     Y  LN L  V + + E LR+YP +  L R VL++ ++    +PAG  IG+  + + +  EL+ +    FKPERF    +    N  +Y PF++GPR C+GQ FA++E K   A +L++Y  +        P  +  L
Sbjct:  332 IATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CP3A2_RAT4.410e-2034.19Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2... [more]
CP56_YEAST5.760e-2034.25Cytochrome P450-DIT2 OS=Saccharomyces cerevisiae G... [more]
CP4S3_DROME5.760e-2032.22Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP3AL_CALJA5.760e-2033.55Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]
CP343_HUMAN5.760e-2032.90Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE... [more]
CP3AA_MESAU7.523e-2034.46Lithocholate 6-beta-hydroxylase OS=Mesocricetus au... [more]
CP131_DROME7.523e-2034.38Probable cytochrome P450 313a1 OS=Drosophila melan... [more]
CP4F3_RAT9.825e-2034.84Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus nor... [more]
CP4AL_PIG9.825e-2030.43Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus s... [more]
CP4D1_DROSI1.283e-1932.12Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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