CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.283e-19
Identity = 53/165 (32.12%), Postives = 88/165 (53.33%), Query Frame = -1
Query:  305 LSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTL 790
            ++ H + Q++  +E+  V GN+K     Y  LN L  V + + E LR+YP +  L R VL++ ++    +PAG  IG+  + + +  EL+ +    FKPERF    +    N  +Y PF++GPR C+GQ FA++E K   A +L++Y  +        P  +  L
Sbjct:  332 IATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.283e-19
Identity = 56/181 (30.94%), Postives = 98/181 (54.14%), Query Frame = -1
Query:  272 LNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILR 811
            L++ M  L+ H D Q++ +QE+ +   N   P Y  +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF +GPR C+G   AL+  K+A   +LQN+SF     Y    T +P     LG++ +L+
Sbjct:  314 LSFIMYSLATHPDVQKKLQQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYW-PEPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF-----YPCKETQIPL---RLGSEALLQ 484          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F2_HUMAN (Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapiens GN=CYP4F2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.676e-19
Identity = 58/181 (32.04%), Postives = 97/181 (53.59%), Query Frame = -1
Query:  293 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGD----DAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPEL 811
            L+W +  L+KH ++QER RQEV ++  + +P   ++ +L HL  + M + E LRL+PP+  +SR V ++  L +   +P G+   + +   H +P +W D    D   F PE   E      ++ +++ PF++GPR C+GQ FA+ E K+  A+ L    F + P +       P   PEL
Sbjct:  337 LSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAHLPFLTMCMKESLRLHPPVPVISRHVTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPENIKE------RSPLAFIPFSAGPRNCIGQTFAMAEMKVVLALTL--LRFRVLPDHTE-----PRRKPEL 504          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3A9_RAT (Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19
Identity = 51/155 (32.90%), Postives = 86/155 (55.48%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            L++ + LL+ H D Q++ + E+     N     Y  L  ++ + M++ E LRLYP    L R    + ++  + +P G  + +P   +H+DP  W +   EF+PERF++  ++   N   Y PF +GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  314 LSFVLYLLAIHPDIQKKLQDEIDAALPNKAHATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYWPEPE-EFRPERFSKK-NQDNINPYMYLPFGNGPRNCIGMRFALMNMKVALFRVLQNFSFQ 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19
Identity = 50/156 (32.05%), Postives = 89/156 (57.05%), Query Frame = -1
Query:  350 LLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 814
            +L++ +  L+ H D Q++ ++E+  V  N  P  Y  +  ++ + M++ E LR++P    L R   K+ ++  + +P GV + +P   +H DP+ W  +  +F PERF++  +      + Y PF SGPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  313 VLSFIIYELATHPDVQQKLQEEIDTVLPNKAPPTYDTVLQMEYLDMVVNETLRIFPIAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYW-PEPEKFLPERFSKKNNDNIDPYI-YTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFK 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4FC_HUMAN (Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.734e-19
Identity = 53/157 (33.76%), Postives = 93/157 (59.24%), Query Frame = -1
Query:  353 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSF 811
            L+W +  L++H ++QER RQEV ++  +  P   ++ +L  L  + M + E LRL+PP   +SR   ++  L +   +P G+   + +I VH +P +W D  V + P RF    SK  ++ +++ PF++GPR C+GQ FA+ E K+  A++L ++ F
Sbjct:  337 LSWVLYNLARHPEYQERCRQEVQELLKDRDPKEIEWDDLAQLPFLTMCVKESLRLHPPAPFISRCCTQDIVLPDGRVIPKGITCLIDIIGVHHNPTVWPDPEV-YDPFRFDPENSKG-RSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALMLLHFRF 491          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F3_MOUSE (Leukotriene-B(4) omega-hydroxylase 2 OS=Mus musculus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.734e-19
Identity = 52/155 (33.55%), Postives = 93/155 (60.00%), Query Frame = -1
Query:  359 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 811
            L+W +  L++H ++QER RQEV ++  + +P+   + +L  L  + M + E LRL+PP+TA+SR   ++  L +   +P GV   + +   H +P +W D  V + P RF +  +   ++ +++ PF++GPR C+GQ FA+ E K+A A+ L  +
Sbjct:  337 LSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTAISRCCTQDIVLPDGRVIPKGVISRISIFGTHHNPAVWPDPEV-YDPFRF-DADNVKGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.876e-19
Identity = 58/184 (31.52%), Postives = 103/184 (55.98%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W +  L+ + + Q+R R E+  + G+     + +L+ +    M + E LRL PP+ ++SR + K   L +  +LPAG+ + L +  +H +P +W D  V F P RF +  S+  ++  ++ PF+SGPR C+GQ FA++E K+A A+ L  +      +   A ++   L P+ G  L L+KL
Sbjct:  323 ISWLLYCLALNPEHQDRCRTEIRSILGDGSSITWEQLDEIPYTTMCIKETLRLIPPIPSISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKV-FDPLRFTKENSEQ-RHPCAFLPFSSGPRNCIGQQFAMLELKVAIALTLLRFRVAADLTRPPAFSSHTVLRPKHGIYLHLKKL 504          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AF_CAVPO (Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.876e-19
Identity = 50/154 (32.47%), Postives = 86/154 (55.84%), Query Frame = -1
Query:  353 LNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSF 811
            L+  M  L+ H D Q++  QE+ +   N   P Y  +  ++ + M++ E LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W  +  EF+PERF++  +K   +   Y PF +GPR C+G+  AL+  K+A   +LQN+SF
Sbjct:  314 LSCIMYSLATHPDVQKKLHQEIDKTLPNKAFPTYDVMMEMEYLDMVVNETLRLYPVANRIERMSKKDFEINGMSFPKGTLVMIPSFALHRDSKYW-PEPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGRRMALMNLKLALIRLLQNFSF 465          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C4D20_DROME (Probable cytochrome P450 4d20 OS=Drosophila melanogaster GN=Cyp4d20 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.876e-19
Identity = 52/153 (33.99%), Postives = 89/153 (58.17%), Query Frame = -1
Query:  341 LSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSP 790
            +++H + Q+R  +E+ +V G +        +L  LK +  ++ E +RLYPP+ A+ R   KE ++G+ T+PA   I L +   H+D   +  D + F+PERF E   +   N  +Y PF++GP+ C+GQ FA++E K+  + +L+ Y  EL P
Sbjct:  332 IARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYF-PDPLSFRPERFLED-QEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY--ELLP 480          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CP4D1_DROME1.283e-1932.12Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP3AE_CAVPO1.283e-1930.94Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
CP4F2_HUMAN1.676e-1932.04Leukotriene-B(4) omega-hydroxylase 1 OS=Homo sapie... [more]
CP3A9_RAT2.189e-1932.90Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9... [more]
CP3A8_MACFA2.189e-1932.05Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP4FC_HUMAN3.734e-1933.76Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE... [more]
CP4F3_MOUSE3.734e-1933.55Leukotriene-B(4) omega-hydroxylase 2 OS=Mus muscul... [more]
CP4X1_RAT4.876e-1931.52Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
CP3AF_CAVPO4.876e-1932.47Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15... [more]
C4D20_DROME4.876e-1933.99Probable cytochrome P450 4d20 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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