CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AP_MOUSE (Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 50/151 (33.11%), Postives = 85/151 (56.29%), Query Frame = -1
Query:  350 MVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 799
            M  L+ H D Q++ + E+ +   N  P  Y  L  ++ + M++ E LRLYP    L R   K+ ++  + +P G  + +P+  +H++PE W  +  EF PERF++  +K   +   Y PF +GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  318 MYELATHPDVQKKLQDEIDRTLPNKAPVTYDALMDMEYLDMVVNESLRLYPIAIRLERVSKKDVEINGVFIPKGTVVMIPIYPLHRNPEYW-PEPQEFCPERFSKE-NKGNIDPYIYMPFGNGPRNCIGMRFALISIKLAVIGVLQNFTVQ 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18
Identity = 56/177 (31.64%), Postives = 101/177 (57.06%), Query Frame = -1
Query:  293 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPEL 811
            L+W +  L+KH ++QE+ RQEV ++  + +P   ++ +L  L  + M + E LRL+PP+  +SR   ++  L +   +P G+   + +I +H +P +W D  V + P RF +   K  ++ +++ PF++GPR C+GQ FA+ E K+  A+ L +  F + P++       P   PEL
Sbjct:  337 LSWVLYHLAKHPEYQEQCRQEVQELLKDREPIEIEWDDLAQLPFLTMCIKESLRLHPPVPVISRCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVWPDPEV-YDPFRFNQENIKE-RSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALTLLH--FRILPTHTE-----PRRKPEL 504          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4CA_MOUSE (Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18
Identity = 58/186 (31.18%), Postives = 98/186 (52.69%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVP--TLHPELGTQLILRKL 811
            ++W    L+ + + Q+R R+E+  + G+     + +L+ +    M + E LR+YPP+ ++SR +       +  +LP G+ + L    +H +P +W +  V F P RFA G S+ +    S+ PF+ G R C+G+ FA+ E K+A A+ L    FEL P     P  +P   L  + G  L L+KL
Sbjct:  328 ISWIFYALATNPEHQQRCRKEIQSLLGDGTSITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEV-FDPSRFAPGSSRHSH---SFLPFSGGARNCIGKQFAMNELKVAVALTL--LRFELLPDPTRVPIPIPRIVLKSKNGIHLHLKKL 507          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18
Identity = 56/184 (30.43%), Postives = 94/184 (51.09%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W    L+ H + Q+R R+EV  V G+     +  L+ +    M + E LRLYPP+  + R +       +  +LP G+Q+ L +  +H +P++W +  V F P RFA     + ++  S+ PF+ G R C+G+ FA+ E K+  A+ L  +     P+ V  P     L  + G  L L+KL
Sbjct:  329 VSWIFYALATHPEHQQRCREEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEV-FDPSRFAPD---SPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLPDPTKVPIPLPRLVLKSKNGIYLYLKKL 508          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AM_HUMAN (Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18
Identity = 55/184 (29.89%), Postives = 97/184 (52.72%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W +  L+ H   QER R+E+  + G+     +  L+ +    M + E LRLYPP+  + R +       +  +LP G+ + L +  +H +P++W +  V F P RFA G   +A++  ++ PF+ G R C+G+ FA+ + K+A A+ L  +     P+ +  P A   L  + G  L LR+L
Sbjct:  330 ISWILYALATHPKHQERCREEIHGLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNLEV-FDPSRFAPG---SAQHSHAFLPFSGGSRNCIGKQFAMNQLKVARALTLLRFELLPDPTRIPIPMARLVLKSKNGIHLRLRRL 509          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AE_MOUSE (Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 55/184 (29.89%), Postives = 92/184 (50.00%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W    L+ H + Q+R R+EV  + G+     +  L  +    M + E LRLYPP+ ++SR +       +  ++P G+   + +  +H +P  W +  V F P RFA   S  +    +Y PF+ G R C+G+ FA+ E K+A A+ L  +     P+ +  P A   L  + G  L L+KL
Sbjct:  327 ISWIFYALATHPEHQQRCREEVQSILGDGTSVTWDHLGQMPYTTMCIKEALRLYPPVISVSRELSSPVTFPDGRSIPKGITATISIYGLHHNPRFWPNPKV-FDPSRFAPDSSHHSH---AYLPFSGGSRNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPIARLVLKSKNGIHLCLKKL 506          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F8_HUMAN (Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18
Identity = 48/155 (30.97%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  359 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 811
            L+W +  L++H ++QER RQEV ++  + +P   ++ +L  L  + M L E LRL+PP+   +R   ++  L  +  +P G    + +  +H +P +W D  V + P RF +  +   ++ +++ PF++GPR C+GQ FA+ E K+  A+ L  +
Sbjct:  337 LSWVLYNLARHPEYQERCRQEVQELLKDREPKEIEWDDLAQLPFLTMCLKESLRLHPPIPTFARGCTQDVVLPDSRVIPKGNVCNINIFAIHHNPSVWPDPEV-YDPFRF-DPENAQKRSPMAFIPFSAGPRNCIGQKFAMAEMKVVLALTLLRF 489          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18
Identity = 46/157 (29.30%), Postives = 91/157 (57.96%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHL---KIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            ++WT+ LL  H ++QER  +E+  +FG++K     + +L   + ++  + + LRL+P +  ++R V ++  +G   +PAG Q  +    +H++P ++     +F P+ F    + A ++  +Y PF++GPR C+GQ FA++E K   + +L+ Y  E
Sbjct:  351 ISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPE-QFNPDNFLPE-NCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIE 505          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4P3_DROME (Probable cytochrome P450 4p3 OS=Drosophila melanogaster GN=Cyp4p3 PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 61/188 (32.45%), Postives = 105/188 (55.85%), Query Frame = -1
Query:  269 LNWTMVLLSKHQDWQERARQEVLQVFGN--NKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSF--ELSPSYVHAPTAVPTLHP--ELGTQLILRK 811
            L + ++ +S + + QE+  QE+     +  N  + G+LN LK ++  + E +RL+P + A+ R   +ET+L N L LP G QI + +  +H++PE W D   EF+PERF    S+  ++  +Y PF++G R C+GQ FA+ E K     +L+ +    E+ P  +   T + TL    ++  +L+ RK
Sbjct:  331 LMFGLMNMSLYPEEQEKCYQEIQANIDDELNILNIGQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYW-DSPEEFRPERFLPENSQ-NRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPEIDPKTIVFQTGL-TLRTKNQIHVKLVRRK 515          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 54/184 (29.35%), Postives = 94/184 (51.09%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W    L+ H + QER R+EV  + G+     +  L+ +    M + E LRLYPP+ ++SR +       +  ++P G+   + +  +H +P  W +  V F P RF+     + ++  +Y PF+ G R C+G+ FA+ E K+A A+ L  +     P+ +  P A   L  + G  L L+KL
Sbjct:  327 ISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKV-FDPSRFSPD---SPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMARLVLKSKNGIHLRLKKL 506          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CP3AP_MOUSE1.419e-1833.11Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE... [more]
CP4FB_HUMAN2.420e-1831.64Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]
CP4CA_MOUSE2.420e-1831.18Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a ... [more]
CP4AA_RAT2.420e-1830.43Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4AM_HUMAN3.161e-1829.89Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE... [more]
CP4AE_MOUSE4.128e-1829.89Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE... [more]
CP4F8_HUMAN5.391e-1830.97Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1... [more]
CP4C3_DROME5.391e-1829.30Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]
CP4P3_DROME7.041e-1832.45Probable cytochrome P450 4p3 OS=Drosophila melanog... [more]
CP4AE_RAT7.041e-1829.35Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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