CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 59/187 (31.55%), Postives = 100/187 (53.48%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPT---LHPELGTQLILRKL 811
            ++W +  L+ + + QER R+EV  + G+     + +L  +    M + E  RL P + ++SR + K  T     TLPAG+ + L +  +H +P +W +  V F P RF++  S   ++  +Y PF++G R C+GQ FA++E K+  A+IL ++     P+    P   P    L P+ G  L L+KL
Sbjct:  325 ISWILYCLALNPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKV-FDPLRFSQENSDQ-RHPYAYLPFSAGSRNCIGQEFAMIELKVTIALILLHFRVTPDPT---RPLTFPNHFILKPKNGMYLHLKKL 506          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F6_RAT (Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 50/155 (32.26%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  359 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 811
            L+W +  L++H ++QER RQEV ++  + +P+   + +L  L  + M + E LRL+PP+  +SR   ++  L +   +P G    + +  VH +P +W D  V + P RF +  +   ++ +++ PF++GPR C+GQ FA+ E K+A A+ L  +
Sbjct:  337 LSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVWPDPEV-YNPFRF-DPENPQKRSPLAFIPFSAGPRNCIGQTFAMSEIKVALALTLLRF 489          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F4_RAT (Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 50/159 (31.45%), Postives = 89/159 (55.97%), Query Frame = -1
Query:  359 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGD----DAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 811
            L+W +  L++H ++QER RQEV ++  + +    ++ +L  L  + M + E LRL+PP+T +SR   ++  L +   +P GV   + +   H +P +W D    D   F PE   +      ++ +++ PF++GPR C+GQ FA+ E K+A A+ L  +
Sbjct:  337 LSWILYNLARHPEYQERCRQEVRELLRDRESTEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRRCTQDIVLPDGRVIPKGVICIINIFATHHNPTVWPDPEVYDPFRFDPENIKD------RSPLAFIPFSAGPRNCIGQTFAMNEMKVALALTLLRF 489          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F3_HUMAN (Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapiens GN=CYP4F3 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 56/177 (31.64%), Postives = 96/177 (54.24%), Query Frame = -1
Query:  293 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPEL 811
            L+W +  L+KH ++QER RQEV ++  + +P   ++ +L  L  + M + E LRL+PP+ A+SR   ++  L +   +P G+   + +   H +P +W D  V + P RF     K  ++ +++ PF++GPR C+GQ FA+ E K+   + L    F + P +       P   PEL
Sbjct:  337 LSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAQLPFLTMCIKESLRLHPPVPAVSRCCTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEV-YDPFRFDPKNIKE-RSPLAFIPFSAGPRNCIGQAFAMAEMKVVLGLTL--LRFRVLPDHTE-----PRRKPEL 504          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 54/184 (29.35%), Postives = 96/184 (52.17%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W +  ++ +   Q+R R+EV ++ G+     + +L  +  + M + E  RLYPP+  + R + K  T +   +LPAG  I L +  +H++  +W D  V F P RF+   +   ++  ++ PF++GPR C+GQ FA+ E K+  A+ L  + F   PS +        L  + G  L L+ L
Sbjct:  324 ISWFLYCMALYPMHQQRCREEVREILGDRDSFQWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEV-FDPLRFSPE-NMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKVPQLILRSKNGIHLYLKPL 505          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 52/154 (33.77%), Postives = 90/154 (58.44%), Query Frame = -1
Query:  341 LSKHQDWQERARQEVLQVFGNNKPDYG----ELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSP 790
            +S+H   QE   +E++ V G + PD      +L  LK +  ++ E +RL+PP+  L R + ++ K+G +T+P    I L    V++DPE + D  V FKPER+ +  + +    ++Y PF+SGP+ C+GQ FA ++ K   + ++++Y  EL P
Sbjct:  332 ISRHPKVQECIYEELVSVLGPD-PDASVTQTKLLELKYLDCVIKETMRLHPPVPILGRYIPEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLV-FKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHY--ELLP 481          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 53/168 (31.55%), Postives = 94/168 (55.95%), Query Frame = -1
Query:  314 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAV 811
            ++W +  L+K+ + Q+R R E+ ++ G+     +  L+ +    M + E LRLY P+  +SR + K  T     +LPAG+ + + +  +H +P  W D  V F P RF+   S+   +  ++ PF++G R C+GQ+FA++E K+A A+ L    F+L+P +   P  V
Sbjct:  323 ISWILYCLAKYPEHQQRCRDEIRELLGDGSSITWEHLSQMPYTTMCIKECLRLYAPVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQV-FNPLRFSRENSEKI-HPYAFIPFSAGLRNCIGQHFAIIECKVAVALTL--LRFKLAPDHSRPPQPV 486          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 57/185 (30.81%), Postives = 98/185 (52.97%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA-EGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W +  ++ + + Q R R+EV ++ G+     + +L  +  + M + E  RLYPP+  + R + K  T +   +LPAG  I + +  +H++  +W D  V F   RF+ E  SK  ++  ++ PF++GPR C+GQ FA+ E K+  AM L  + F L PS +        L  + G  L L+ L
Sbjct:  324 ISWFLYCMALYPEHQHRCREEVREILGDQDFFQWDDLGKMTYLTMCIKESFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVWPDPEV-FDSLRFSTENASK--RHPFAFMPFSAGPRNCIGQQFAMSEMKVVTAMCLLRFEFSLDPSRLPIKMPQLVLRSKNGFHLHLKPL 505          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C4G15_DROME (Cytochrome P450 4g15 OS=Drosophila melanogaster GN=Cyp4g15 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 46/149 (30.87%), Postives = 92/149 (61.74%), Query Frame = -1
Query:  359 LLSKHQDWQERARQEVLQVFGNNK--PDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKL--GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 793
            L+  HQD Q+R   E+  +FG+++    + +   +K ++  L E LR+YPP+  ++R + ++ KL  GN  +P G  + +  +L+H++P+++ +  V F P+ F     +A ++  ++ PF++GPR CVG+ +A+++ K+  + IL+NY
Sbjct:  394 LMGIHQDIQDRVLAELDSIFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIARELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNV-FDPDNFLPE-RQANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNY 540          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C356_FUNHE (Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=cyp3a56 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = -1
Query:  347 LSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFASGPRICVGQNFALVEAKMAPAMILQNYSFEL 790
            L+ + +  ++ ++E+   F N  P  Y  L  ++ +  ++ E LRL+P    L R      ++  + +P  + + +P   +H+DPE+W +    FKPERF    SK  K+ +    Y PF SGPR C+G  FALV  K+A   ILQ YSF +
Sbjct:  320 LATNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGIVIPKDMVVMIPTWPLHRDPEIWPEPEA-FKPERF----SKKNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSV 466          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CP4X1_HUMAN2.049e-1731.55Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP4F6_RAT2.049e-1732.26Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6... [more]
CP4F4_RAT2.049e-1731.45Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4... [more]
CP4F3_HUMAN2.049e-1731.64Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapie... [more]
CP4B1_MOUSE2.049e-1729.35Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
C4D21_DROME2.049e-1733.77Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
CP4Z1_HUMAN2.676e-1731.55Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP4B1_HUMAN2.676e-1730.81Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
C4G15_DROME2.676e-1730.87Cytochrome P450 4g15 OS=Drosophila melanogaster GN... [more]
C356_FUNHE2.676e-1733.55Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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