CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CYPD_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 1 OS=Bacillus subtilis GN=cypD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = -1
Query:  356 LLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN---LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQV---SYFPFASGPRICVGQNFALVEAKMAPAMILQNYS 814
            LL++    L KH D  ++A +EV +V  +  P Y ++  L  ++MIL E LRL+P   A S    ++T +G    +T    + + +P +  H+D + WG DA EF+PERF        ++QV   +Y PF +G R C+G  FAL EA +   MIL+ ++
Sbjct:  275 LLSFATYFLLKHPDKLKKAYEEVDRVLTDAAPTYKQVLELTYIRMILNESLRLWPTAPAFSLYPKEDTVIGGKFPITTNDRISVLIPQL--HRDRDAWGKDAEEFRPERFEH------QDQVPHHAYKPFGNGQRACIGMQFALHEATLVLGMILKYFT 425          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 50/155 (32.26%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  359 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 811
            L+W +  L++H ++QER RQEV ++  + +P+   + +L  L  + M + E LRL+PP   L R   ++  L +   +P G    + +  +H +P +W D  V F P RF +  ++  ++ +S+ PF++GPR C+GQ FA+ E K+  A+ L  +
Sbjct:  339 LSWILYNLARHPEYQERCRQEVWELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEV-FDPFRF-DSENRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVVVALTLLRF 491          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 57/186 (30.65%), Postives = 99/186 (53.23%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVP--TLHPELGTQLILRKL 811
            ++W    L+ + + Q+  R+E+  + G+     + +L+ +    M + E LR+YPP+TA+SR +       +  +LP G+ + L    +H +P +W +  V F P RFA    +++++  S+ PF+ G R C+G+ FA+ E K+A A+ L    FEL P     P  +P   L  + G  L L+KL
Sbjct:  328 ISWIFYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEV-FDPYRFAP---ESSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTL--LRFELLPDPTRIPIPIPRLVLKSKNGIYLRLKKL 507          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4A2_RAT (Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 56/186 (30.11%), Postives = 96/186 (51.61%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVP--TLHPELGTQLILRKL 811
            ++W    L+ H + QER R+EV  + G+     +  L+ +    M + E LRLY P+ ++SR +       +  ++P G+++ + +  +H +P  W +  V F P RF+     + ++  +Y PF+ G R C+G+ FA+ E K+A A+ L    FEL P     P  +P   L  + G  L L+KL
Sbjct:  324 ISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKV-FDPSRFSPD---SPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTL--LRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKL 503          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C330_FUNHE (Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=cyp3a30 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = -1
Query:  347 LSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFASGPRICVGQNFALVEAKMAPAMILQNYSFEL 790
            L+ + +  ++ ++E+   F N  P  Y  L  ++ +  ++ E LRL+P    L R      ++  + +P  + + +P   +H+DPE+W +    FKPERF    SK  K+ +    Y PF SGPR C+G  FALV  K+A   ILQ YSF +
Sbjct:  320 LATNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGVVIPKDMVVMIPTWPLHRDPEIWPEPEA-FKPERF----SKKNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSV 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 51/159 (32.08%), Postives = 82/159 (51.57%), Query Frame = -1
Query:  341 LNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYGELNH-LKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSP 811
            L++   LL+ H D QER  +EV    G +  P+Y  L   L  + M++ E LR+YPP    +R   ++ ++    +PAG  + + +  +H DPE W +    F PERF    ++  +   +Y PF +GPR C+G    L+  K+    +L  + FE SP
Sbjct:  350 LSFITYLLATHPDCQERLLKEVDLFMGKHPAPEYHSLQEGLPYLDMVISETLRMYPPAFRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPET-FDPERFT-AEARLQRRPFTYLPFGAGPRSCLGVRLGLLVVKLTILQVLHKFRFEASP 506          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP311_DROME (Probable cytochrome P450 311a1 OS=Drosophila melanogaster GN=Cyp311a1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = -1
Query:  341 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSP 811
            +++ +  L+K  + Q R R+E+  V  +   D   LN L  ++ ++ EVLRLY  +    R   + T++G  T  AGV + + M  +  D E +  D   FKPER+       A    SY PF+ GP +C+G+ ++L+  K+  A +++ +  ELSP
Sbjct:  302 MSFVLYALAKFPETQTRLRKELQDVALDETTDLDALNGLPYLEALIKEVLRLYTIVPTTGRQTTQSTEIGGRTYCAGVTLWINMYGLAHDKEYY-PDPYAFKPERWLPEDGAVAPPAFSYIPFSGGPHVCIGRRYSLLLMKLLTARLVREFQMELSP 457          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4V3_MOUSE (Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17
Identity = 49/156 (31.41%), Postives = 92/156 (58.97%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFG-NNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            +NW++ LL  + + Q +  QE+ +VFG +++P    +L  LK +  ++ E LR++P +   +R++ ++ ++G   +  G +  +    +H+DP  + D   EF+PERF    S+  ++  +Y PF++GPR C+GQ FA++E K   A IL+ +  E
Sbjct:  338 INWSLYLLGTNPEVQRKVDQELDEVFGRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPE-EFRPERFFPENSQG-RHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQFWVE 491          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP46A_MOUSE (Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp46a1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = -1
Query:  299 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHP 811
            L +T++ LS+  +   R + EV +V G+ +  DY +L  L+ +  +L E LRLYPP     R + +ET +  + +P    + L    V    + + +D + F P+RF  G   A K + +YFPF+ G R C+GQ FA +E K+  A +LQ   F L P          TL P
Sbjct:  311 LAFTVMELSRQPEIVARLQAEVDEVVGSKRHLDYEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPL-LFSTYVMGRMDTYFEDPLTFNPDRFGPG---APKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLVPGQRFGLQEQATLKP 478          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP6J1_BLAGE (Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6J1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.328e-16
Identity = 57/160 (35.62%), Postives = 85/160 (53.12%), Query Frame = -1
Query:  341 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD--YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLG-NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSP 811
            L + +  LS HQD Q  AR E+  V  ++K    Y  +  +K + M++ E LR YP +  L R   ++  L  +L LPAG  + +P+  +H D + +   A +F PERF+E  +K      +Y PF  GPR C+G  F  ++ K A   IL N  FE+SP
Sbjct:  314 LTFALYELSVHQDIQTTARTEIKDVLEHHKKKVTYYSIKDMKYLDMVVNETLRKYPAIPFLDRRCQEDYPLTQDLMLPAGTGVYIPVYALHHDSKYFPSPA-KFDPERFSEK-NKQNIPHFAYMPFGEGPRNCIGMRFGSMQVKAALIHILSN--FEVSP 469          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CYPD_BACSU3.495e-1735.22Probable bifunctional P-450/NADPH-P450 reductase 1... [more]
CP4F5_RAT3.495e-1732.26Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP4AC_RAT3.495e-1730.65Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4A2_RAT3.495e-1730.11Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2... [more]
C330_FUNHE3.495e-1733.55Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=c... [more]
THAS_MOUSE4.564e-1732.08Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]
CP311_DROME4.564e-1731.21Probable cytochrome P450 311a1 OS=Drosophila melan... [more]
CP4V3_MOUSE5.961e-1731.41Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1... [more]
CP46A_MOUSE1.017e-1633.14Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp4... [more]
CP6J1_BLAGE1.328e-1635.63Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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