CB290841

Overview
NameCB290841
Unique NameCB290841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.625e-22
Identity = 48/82 (58.54%), Postives = 66/82 (80.49%), Query Frame = 1
Query:  523 KYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVFGIC 768
            KY++GR LG+G+FAKV + R+  T ++VAIK++DKEKV+K  +I QIKREIS M++ RHPNV+ +YEVMA+KT+IY V   C
Sbjct:   11 KYDVGRLLGQGTFAKVYYGRSILTNQSVAIKMIDKEKVMKVGLIEQIKREISVMRIARHPNVVELYEVMATKTRIYFVMEYC 92          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKA_ORYSJ (CBL-interacting protein kinase 10 OS=Oryza sativa subsp. japonica GN=CIPK10 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.512e-21
Identity = 44/78 (56.41%), Postives = 65/78 (83.33%), Query Frame = 1
Query:  523 KYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIV 756
            +YE+G+ LG+GSFAKV   RN +  ++VAIK++DKEK+LK +++ QI+REIS M L+RHP ++++YEVMA+KTKIY +
Sbjct:   12 RYEIGKLLGQGSFAKVYHGRNIKNSQSVAIKVIDKEKILKCELMDQIRREISVMNLVRHPCIVQLYEVMATKTKIYFI 89          

HSP 2 Score: 22.3274 bits (46), Expect = 1.512e-21
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  737 RQKYTLFLEFVTGGELFD 790
            + K    LE+V GGELF+
Sbjct:   83 KTKIYFILEYVKGGELFN 100          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKD_ARATH (CBL-interacting serine/threonine-protein kinase 13 OS=Arabidopsis thaliana GN=CIPK13 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.962e-21
Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = 1
Query:  523 KYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIV 756
            KYE+G+ LG GSFAKV  ARN  +GE+VAIK++DKEK++K  + G IKREIS ++ +RHP ++ + EVMA+KTKIYIV
Sbjct:   56 KYEIGKLLGHGSFAKVYLARNIHSGEDVAIKVIDKEKIVKSGLAGHIKREISILRRVRHPYIVHLLEVMATKTKIYIV 133          

HSP 2 Score: 20.7866 bits (42), Expect = 1.962e-21
Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  737 RQKYTLFLEFVTGGELFD 790
            + K  + +E+V GGEL++
Sbjct:  127 KTKIYIVMEYVRGGELYN 144          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.219e-21
Identity = 46/78 (58.97%), Postives = 67/78 (85.90%), Query Frame = 1
Query:  523 KYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIV 756
            +YE+G+ LG+G+FAKV  AR+ +TG++VAIK++DKE++LK  M  QIKREIS M+L+RHPN++ ++EVMA+K+KIY V
Sbjct:   11 RYEVGKFLGQGTFAKVYHARHLKTGDSVAIKVIDKERILKVGMTEQIKREISAMRLLRHPNIVELHEVMATKSKIYFV 88          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKQ_ORYSJ (CBL-interacting protein kinase 26 OS=Oryza sativa subsp. japonica GN=CIPK26 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.322e-21
Identity = 46/78 (58.97%), Postives = 67/78 (85.90%), Query Frame = 1
Query:  523 KYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIV 756
            +YE+GR LG+G+FAKV +ARN  +G+ VAIK++DKEKV +  ++ QIKREIS M+L++HPN+++++EVMASK+KIY V
Sbjct:   11 RYEIGRQLGQGNFAKVYYARNLTSGQAVAIKMIDKEKVTRVGLMVQIKREISIMRLVKHPNILQLFEVMASKSKIYFV 88          

HSP 2 Score: 20.7866 bits (42), Expect = 3.322e-21
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  734 ARQKYTLFLEFVTGGELF 787
            ++ K    LE+  GGELF
Sbjct:   81 SKSKIYFVLEYAKGGELF 98          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.304e-21
Identity = 43/80 (53.75%), Postives = 65/80 (81.25%), Query Frame = 1
Query:  517 VGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIV 756
            +GKYELG+ LG G+FAKV  A+N ++G+ VAIK++DKEK++K  ++  IKREIS ++ +RHP ++ ++EVMA+K+KIY V
Sbjct:   71 MGKYELGKLLGHGTFAKVYLAQNIKSGDKVAIKVIDKEKIMKSGLVAHIKREISILRRVRHPYIVHLFEVMATKSKIYFV 150          

HSP 2 Score: 21.1718 bits (43), Expect = 7.304e-21
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  737 RQKYTLFLEFVTGGELFD 790
            + K    +E+V GGELF+
Sbjct:  144 KSKIYFVMEYVGGGELFN 161          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPK2_ARATH (CBL-interacting serine/threonine-protein kinase 2 OS=Arabidopsis thaliana GN=CIPK2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.431e-21
Identity = 45/82 (54.88%), Postives = 65/82 (79.27%), Query Frame = 1
Query:  523 KYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVFGIC 768
            +YE+GR LG+G+FAKV F R+  T E+VAIK++DK+KV++  +  QIKREIS M++ +HPNV+ +YEVMA+K++IY V   C
Sbjct:   11 RYEVGRLLGQGTFAKVYFGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYC 92          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.453e-20
Identity = 44/76 (57.89%), Postives = 65/76 (85.53%), Query Frame = 1
Query:  523 KYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIY 750
            +Y +GR LG+G+F KV +ARN  +G++VAIK++DKEK+LK  ++ QIKREIS M+L+RHPNV++++EVMA+K+ IY
Sbjct:   10 RYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGLMEQIKREISIMRLVRHPNVLQLFEVMATKSNIY 85          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKL_ARATH (CBL-interacting serine/threonine-protein kinase 21 OS=Arabidopsis thaliana GN=CIPK21 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.622e-20
Identity = 44/81 (54.32%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  514 RVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIV 756
            ++GKYE+GRT+GEG+FAKVK   +T  G  VA+KI+DK  V++  +  Q+KREI TMKL+ HPN+++++EV+ +KTKI IV
Sbjct:    8 KIGKYEIGRTIGEGNFAKVKLGYDTTNGTYVAVKIIDKALVIQKGLESQVKREIRTMKLLNHPNIVQIHEVIGTKTKICIV 88          

HSP 2 Score: 20.7866 bits (42), Expect = 4.622e-20
Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  737 RQKYTLFLEFVTGGELFD 790
            + K  + +E+V+GG+L D
Sbjct:   82 KTKICIVMEYVSGGQLSD 99          
BLAST of CB290841 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.991e-20
Identity = 44/83 (53.01%), Postives = 64/83 (77.11%), Query Frame = 1
Query:  508 RTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIV 756
            R    KYE+GR LG+G+F KV + +   TGE+VAIKI++K++V +  M+ QIKREIS M+L+RHPN++ + EVMA+KTKI+ +
Sbjct:   37 RVLFAKYEMGRLLGKGTFGKVYYGKEITTGESVAIKIINKDQVKREGMMEQIKREISIMRLVRHPNIVELKEVMATKTKIFFI 119          

HSP 2 Score: 21.1718 bits (43), Expect = 5.991e-20
Identity = 8/17 (47.06%), Postives = 11/17 (64.71%), Query Frame = 2
Query:  737 RQKYTLFLEFVTGGELF 787
            + K    +E+V GGELF
Sbjct:  113 KTKIFFIMEYVKGGELF 129          
The following BLAST results are available for this feature:
BLAST of CB290841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
CIPKA_ARATH7.625e-2258.54CBL-interacting serine/threonine-protein kinase 10... [more]
CIPKA_ORYSJ1.512e-2156.41CBL-interacting protein kinase 10 OS=Oryza sativa ... [more]
CIPKD_ARATH1.962e-2160.26CBL-interacting serine/threonine-protein kinase 13... [more]
CIPKF_ARATH2.219e-2158.97CBL-interacting serine/threonine-protein kinase 15... [more]
CIPKQ_ORYSJ3.322e-2158.97CBL-interacting protein kinase 26 OS=Oryza sativa ... [more]
CIPKI_ARATH7.304e-2153.75CBL-interacting serine/threonine-protein kinase 18... [more]
CIPK2_ARATH8.431e-2154.88CBL-interacting serine/threonine-protein kinase 2 ... [more]
CIPKS_ORYSJ2.453e-2057.89CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]
CIPKL_ARATH4.622e-2054.32CBL-interacting serine/threonine-protein kinase 21... [more]
CIPKP_ARATH5.991e-2053.01CBL-interacting serine/threonine-protein kinase 25... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01dh04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dh04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290841 ID=CB290841; Name=CB290841; organism=Citrus sinensis; type=EST; length=791bp
GCACTAGGCTACGATCCAGCTCCCAAAATTTCTTCGCAAGAATCTCCTCA
ATAATTCACGTAGATGTACGTCTCTGATTTATCTTCTCAGTGCAAGCCCC
TTTATAGATCCGTGCGCTAATTAATTATTATGATTATTATTTCTTTATTC
GACTGAAATTTGCGAGTAAATACTTCGATTTTGCCAAAATCATAATTTAC
ATCCTTTCTCGGCTGATTCACTCGATTCCATGGGGTCCATGTCTGATCTG
TCGGTCACAATCTCTCATCGATTCGTCCTGAATTGTCGAGAAGCAAAGAT
GAGGGTAGAGAAGTCGCAGGTATGGCAGCCGTGCAAAAAGAAGAGGTCTT
GATCGTTAGTAAATAATCTCCAAAGCGAGAGAGAAAAAATCGAAAATAAG
AAGAGATTTTTAAATTATATTGAGGAAGGGAAGGGAACGAAAACTGAATC
TTAGGTTGAGCGAAGATTGAAGGGAAGGACATGGCTTCTCGCACAGGCGG
AGCAAGCAGGACACGTGTTGGGAAGTACGAGTTAGGAAGGACGCTCGGAG
AAGGAAGCTTCGCCAAAGTGAAGTTTGCTAGAAACACTGAAACTGGAGAA
AATGTCGCCATTAAAATTCTCGATAAAGAAAAGGTTCTCAAGCATAAGAT
GATCGGTCAGATTAAGCGTGAAATTTCAACCATGAAACTTATTAGACACC
CTAATGTCATCCGCATGTATGAGGTGATGGCAAGCAAGACAAAAATATAC
ATTGTTTTTGGAATTTGTGACTGGTGGTGAACTTTTTGACA
back to top