CB290856

Overview
NameCB290856
Unique NameCB290856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEU2 (Agmatine deiminase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aguA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.735e-49
Identity = 99/180 (55.00%), Postives = 126/180 (70.00%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L  YL V K+IWLP GLF +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   AL+IL +  DA+GR   + K+ +PGPL+ TEEE AG++Q   ++ R    RLA SYVNF I NGGIIAP F D   D +A  +L + FP++EVV +   RE++LGGGNIHC TQQQPA
Sbjct:  188 QIETILGDYLAVDKVIWLPEGLF-NDETDGHVDNFCCYIRPGEVLLAWTDDPEDPNYSRCHAALSILENTLDAKGRAFIVHKMPIPGPLFATEEECAGVDQVHGSQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDEKAREILQKLFPEHEVV-MAPGRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB5 (Putative agmatine deiminase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=aguA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.797e-49
Identity = 101/182 (55.49%), Postives = 127/182 (69.78%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE+ L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS  AL +L +  DA+GRKL+I  L  PGPLY TEEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP+YE++G+  AREI+LGGGNIHC TQQ P+
Sbjct:  191 KEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESLGVT-EGTGVPRTAGERLAGSYVNFLITNNRIVFPML-DPATDDIAAQKLQEIFPEYEIIGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB9 (Putative agmatine deiminase OS=Shewanella baltica (strain OS195) GN=aguA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.149e-48
Identity = 102/182 (56.04%), Postives = 127/182 (69.78%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE+ L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS  AL +L +  DA+GRKL+I  L  PGPLY TEEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP+YE+VG+  AREI+LGGGNIHC TQQ P+
Sbjct:  191 KEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESLGVT-EGTGVPRTAGERLAGSYVNFLITNNRIVFPLL-DPTTDDIAAQKLQEIFPEYEIVGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSESM (Agmatine deiminase OS=Pseudomonas syringae pv. tomato GN=aguA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.149e-48
Identity = 100/180 (55.56%), Postives = 126/180 (70.00%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L  YL V KIIWLP GLF +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   AL+IL +  DA+GR   + K+ +PGPL+ TEEE AG++Q   ++ R    RLA SYVNF I NGGIIAP F D   D +A  +L + FP++EVV +   RE++LGGGNIHC TQQQPA
Sbjct:  188 QIEAVLSDYLAVDKIIWLPDGLF-NDETDGHVDNFCCYIRPGEVLLAWTDDPEDPNYPRCHAALSILENTRDAQGRAFIVHKMPIPGPLFATEEECAGVDQVHGSQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDEKAREILQKLFPEHEVV-MAPGRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEF5 (Agmatine deiminase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=aguA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.149e-48
Identity = 95/180 (52.78%), Postives = 126/180 (70.00%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            +IE  L+ +L V +I+WLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   AL +L +  DA+GR  ++ K+ +PGPLY TEEE AG++    ++ R    RLA SYVNF I NGGIIAP F D   D +A  +L Q FP++EVV +   RE++LGGGNIHC TQQQPA
Sbjct:  188 EIEAVLREHLAVEQIVWLPDGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYPRCQAALQVLENTRDAKGRTFKVHKMPIPGPLYATEEECAGVDAVEGSQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDAQAKAILQQLFPEHEVVMVP-GRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEFS (Agmatine deiminase OS=Pseudomonas fluorescens (strain SBW25) GN=aguA PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.501e-48
Identity = 98/182 (53.85%), Postives = 123/182 (67.58%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            + QIE  L A L V KIIWLP GLF +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   A+ +L  +TDA+GR   + K+ +PGPLY TE E AG++     + R    RLA SYVNF I NGGIIAP F D   D +A  +L   FP++EVV +   RE++LGGGNIHC TQQQPA
Sbjct:  186 RAQIEAVLSANLAVDKIIWLPDGLF-NDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMNVLQSSTDAQGRSFTVHKMPIPGPLYATEAECAGVDPVDGTQERNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSQAKAILQDLFPQHEVVMVP-GRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_LACSS (Putative agmatine deiminase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=aguA PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.960e-48
Identity = 100/182 (54.95%), Postives = 132/182 (72.53%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE+ LK YL V KIIWL +G++ D+ TNGH+DN+  F KPG V+L+WTDD++DPQY  S E   +L + TDA+GRKLQ+ KL++P P+ +TE E+ G++      PRLAG RLAASYVN+Y ANGGI+ P F D   D +A  +L + +P  ++VG+  AREI+LGGGNIHC TQQ PA
Sbjct:  185 KEQIESILKEYLNVEKIIWLKKGIYLDE-TNGHVDNIANFVKPGQVVLAWTDDQSDPQYAISKENYDMLINETDAKGRKLQVEKLYLPKPILITEAESQGVDTVDGTLPRLAGDRLAASYVNYYTANGGIVFPLFND-PMDEKAQEILQKLYPDRKIVGVP-AREILLGGGNIHCITQQIPA 363          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB2 (Putative agmatine deiminase OS=Shewanella baltica (strain OS223) GN=aguA PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.559e-48
Identity = 101/182 (55.49%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE+ L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS  A  +L +  DA+GRKL+I  L  PGPLY TEEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP+YE+VG+  AREI+LGGGNIHC TQQ P+
Sbjct:  191 KEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYSRSKAAFDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNNRIVFPLL-DPATDDIAAQKLQEIFPEYEIVGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_ERWCT (Putative agmatine deiminase OS=Erwinia carotovora subsp. atroseptica GN=aguA PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.559e-48
Identity = 102/181 (56.35%), Postives = 129/181 (71.27%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K +IE  ++ YL +  IIWL  G++ +D+T+GHIDNMCCF +PG V L WTDD+ DPQY RSV A  +LS A DA+GR+L+I KL  PGPL+ T+EEA G++  G+A  RLAG+RLA SYVNF I+N  II P   D+K D  A  +L Q FP Y + G+  AREI+LGGGNIHC TQQ P
Sbjct:  189 KAEIEQLMRDYLSISTIIWLEEGVY-NDETDGHIDNMCCFVRPGEVALHWTDDENDPQYARSVAAYEVLSAARDAQGRELKIWKLPAPGPLHATKEEAQGVD-SGDAVERLAGSRLAGSYVNFLISNQQIIFPLL-DEKTDDVARDLLQQMFPDYLISGVP-AREILLGGGNIHCITQQIP 365          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEMY (Agmatine deiminase OS=Pseudomonas mendocina (strain ymp) GN=aguA PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48
Identity = 92/180 (51.11%), Postives = 126/180 (70.00%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            +IE  L+ +L +  +IWLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD+ DP Y R   A+ +L    DA+GR+L + K+ +PGP++ +EEE AG++    ++ R    RLA SYVNF I NGGI+AP F D K D EA  +L Q FP++ VV +   REI+LGGGNIHC TQQQPA
Sbjct:  188 EIEAVLREHLAIDTVIWLPEGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDQNDPNYPRCQAAMRVLESVRDAKGRQLIVHKMPIPGPIHASEEECAGVDAAEGSQERSPAVRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQQVFPEHRVVMVP-GREILLGGGNIHCITQQQPA 364          
The following BLAST results are available for this feature:
BLAST of CB290856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
AGUA_PSEU26.735e-4955.00Agmatine deiminase OS=Pseudomonas syringae pv. syr... [more]
AGUA_SHEB58.797e-4955.49Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_SHEB91.149e-4856.04Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_PSESM1.149e-4855.56Agmatine deiminase OS=Pseudomonas syringae pv. tom... [more]
AGUA_PSEF51.149e-4852.78Agmatine deiminase OS=Pseudomonas fluorescens (str... [more]
AGUA_PSEFS1.501e-4853.85Agmatine deiminase OS=Pseudomonas fluorescens (str... [more]
AGUA_LACSS1.960e-4854.95Putative agmatine deiminase OS=Lactobacillus sakei... [more]
AGUA_SHEB22.559e-4855.49Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_ERWCT2.559e-4856.35Putative agmatine deiminase OS=Erwinia carotovora ... [more]
AGUA_PSEMY3.343e-4851.11Agmatine deiminase OS=Pseudomonas mendocina (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02aa04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02aa04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290856 ID=CB290856; Name=CB290856; organism=Citrus sinensis; type=EST; length=647bp
AAAACACTCATGCTCCATCTGGAGAACCACGCTGCTGCCTCTGAGGTCAG
AGTTATAATTTCAGAATCTAATCAATCTAACTTCCCAGCATTTGTTGGAA
TGGCTGGTTGTTGTTGAGTAAAGCAATGTATATTTCCACCTCCCAAAACA
ATTTCCCTTGCTCTTTCAATTCCTACCACTTCATACTTAGGAAAGGCTTG
AAACAGGACACCAACAGCTTCACCGTCCCACTTTTTGTCCCCAAACTGGG
GTGCGATGATTCCTCCATTTGCAATGTAAAAATTCACATATGAAGCAGCA
AGTCTTGTACCCGCAAGTCTTGGTTTAGCCTCACCATCCTGATTAAGTCC
AGCAGCTTCTTCTTCTGTCATATAAAGTGGCCCTGGTACATGAAGTTTAA
TTATTTGTAATTTCCGACCTCTGGCATCAGTAGCATCAGAGAGAATAGTC
AACGCCTCCACAGATCGTTCGTACTGAGGATCTGTTTTATCATCAGTCCA
AGACAGTAACACCACACCAGGCTTTGAAAAACAGCACATATTGTCAATAT
GGCCATTAGTATCATCATCACCAAATAATCCACGAGGCAACCATATAATC
TTCATGACTCCAAGATATGCCTTAAGTTCGTTCTCTATTTGTCCTTT
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