CB290856

Overview
NameCB290856
Unique NameCB290856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEU5 (Agmatine deiminase OS=Pseudomonas stutzeri (strain A1501) GN=aguA PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.702e-48
Identity = 98/180 (54.44%), Postives = 125/180 (69.44%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L+ +L V  IIWLP GLF +D+T+GH+DN CCF +PG VLL+WTDD  DP Y R   A+ +L  A DA+GR L + K+ +PGPL+ ++ E AG+     ++ R    RLA SYVNF I NGGIIAP FGD   DGEA  +L + FP+++VV +   REI+LGGGNIHC TQQQPA
Sbjct:  188 QIEAVLREHLAVDSIIWLPHGLF-NDETDGHVDNFCCFVRPGEVLLAWTDDANDPNYARCQAAMAVLQRARDAKGRALIVHKIPIPGPLHASDAECAGVVALDGSQLRDPSIRLAGSYVNFLIVNGGIIAPAFGD-PLDGEAERILREVFPEHDVVMVP-GREILLGGGNIHCITQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEP1 (Agmatine deiminase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=aguA PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.702e-48
Identity = 95/180 (52.78%), Postives = 124/180 (68.89%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L+ +L V  ++WLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   A+ +L +  DA+GR+  + K+ +PGPLY T EE AG++Q   ++ R    RLA SYVNF I NGGIIAP F D   D EA  +L + FP +EVV I   RE++LGGGNIHC TQQQPA
Sbjct:  188 QIEAVLRDHLAVDTVVWLPDGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMDVLKNTRDAKGREFIVHKMPIPGPLYATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB8 (Putative agmatine deiminase OS=Shewanella baltica (strain OS185) GN=aguA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.447e-48
Identity = 101/182 (55.49%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE+ L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD+ DPQY RS  AL +L +  DA+GRKL+I  L  PGPLY TEEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP+YE+VG+  AREI+LGGGNIHC TQQ P+
Sbjct:  191 KEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDEADPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESLGVT-EGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPTTDDIAAQKLQEIFPEYEIVGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEPK (Agmatine deiminase OS=Pseudomonas putida (strain KT2440) GN=aguA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 94/180 (52.22%), Postives = 124/180 (68.89%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L+ +L V  ++WLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   A+ +L +  DA+GR+  + K+ +PGPL+ T EE AG++Q   ++ R    RLA SYVNF I NGGIIAP F D   D EA  +L + FP +EVV I   RE++LGGGNIHC TQQQPA
Sbjct:  188 QIEAVLRDHLAVDTVVWLPDGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMDVLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEPG (Agmatine deiminase OS=Pseudomonas putida (strain GB-1) GN=aguA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 95/180 (52.78%), Postives = 123/180 (68.33%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L+  L V  ++WLP GLF +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   A+ +L +  DA+GR+  + K+ +PGPL+ T EE AG++Q   ++ R    RLA SYVNF I NGGIIAP F D   D EA  +L + FP +EVV I   RE++LGGGNIHC TQQQPA
Sbjct:  188 QIEAVLRDQLAVDTVVWLPDGLF-NDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMEVLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARAILAKIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSE14 (Agmatine deiminase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aguA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 98/180 (54.44%), Postives = 124/180 (68.89%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L  YL V K++WLP GLF +D+T+GH+DN CC+ +PG VLL+WTDD  DP Y R   AL IL +  DA+GR   + K+ +PGPL+ TEEE AG++Q   ++ R    RLA SYVNF I NGGIIAP F D   D +A  +L   FP++EVV +   RE++LGGGNIHC TQQQPA
Sbjct:  188 QIEAILGDYLAVDKVVWLPDGLF-NDETDGHVDNFCCYIRPGEVLLAWTDDPEDPNYSRCHAALGILENTLDAKGRAFIVHKMPIPGPLFATEEECAGVDQVHGSQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDEKARELLQTLFPEHEVV-MAPGRELLLGGGNIHCLTQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_MYCCT (Putative agmatine deiminase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=aguA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.659e-47
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K QIE  LK Y GV K+IWLP G++ +D+TNGH+DN+     PG V+L+WTDD TDPQYERS  A  IL++  DA+GRK+++ KLH PGPL++T+EEA G++   +   R    R+ ASY NFYIAN  II P FGD K+D  AV  L   +P +++  +  AREI+LGGGNIHC TQQQP
Sbjct:  185 KEQIEENLKEYCGVEKVIWLPLGVY-NDETNGHVDNLLHVVSPGHVVLTWTDDTTDPQYERSKLAYDILTNTLDAKGRKIKVTKLHQPGPLFITKEEAEGIDV-CDTMSREPEQRMPASYANFYIANNAIILPIFGD-KYDDLAVKTLQSVYPNHKIETV-MAREILLGGGNIHCITQQQP 361          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHESA (Putative agmatine deiminase OS=Shewanella sp. (strain ANA-3) GN=aguA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.167e-47
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE  L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS  AL +L +  DA+GRKL+I  L  PGPLY TEEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP++++VG+  AREI+LGGGNIHC TQQ P+
Sbjct:  191 KEQIEALLRDYLNVKQFIWLEEGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQEIFPEHKIVGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHESM (Putative agmatine deiminase OS=Shewanella sp. (strain MR-4) GN=aguA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.696e-47
Identity = 100/182 (54.95%), Postives = 125/182 (68.68%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE  L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS  AL +L +  DA+GRKL+I  L  PGPLY TEEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L   FP++++VG+  AREI+LGGGNIHC TQQ P+
Sbjct:  191 KEQIEALLRDYLNVKQFIWLEEGVYMDE-TDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQDIFPEHKIVGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHEON (Putative agmatine deiminase OS=Shewanella oneidensis GN=aguA PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 3.696e-47
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE  L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD++DPQY RS  AL +L +  DA+GRKL+I  L  PGPLY +EEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP++E+VG+  AREI+LGGGNIHC TQQ PA
Sbjct:  191 KEQIEGLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMCCFARPGEVILHWTDDESDPQYPRSKAALEVLQNTVDAQGRKLKIHLLPQPGPLYCSEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP-AREILLGGGNIHCITQQIPA 368          
The following BLAST results are available for this feature:
BLAST of CB290856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
AGUA_PSEU55.702e-4854.44Agmatine deiminase OS=Pseudomonas stutzeri (strain... [more]
AGUA_PSEP15.702e-4852.78Agmatine deiminase OS=Pseudomonas putida (strain F... [more]
AGUA_SHEB87.447e-4855.49Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_PSEPK1.659e-4752.22Agmatine deiminase OS=Pseudomonas putida (strain K... [more]
AGUA_PSEPG1.659e-4752.78Agmatine deiminase OS=Pseudomonas putida (strain G... [more]
AGUA_PSE141.659e-4754.44Agmatine deiminase OS=Pseudomonas syringae pv. pha... [more]
AGUA_MYCCT1.659e-4754.14Putative agmatine deiminase OS=Mycoplasma capricol... [more]
AGUA_SHESA2.167e-4754.95Putative agmatine deiminase OS=Shewanella sp. (str... [more]
AGUA_SHESM3.696e-4754.95Putative agmatine deiminase OS=Shewanella sp. (str... [more]
AGUA_SHEON3.696e-4754.95Putative agmatine deiminase OS=Shewanella oneidens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_02aa04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02aa04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290856 ID=CB290856; Name=CB290856; organism=Citrus sinensis; type=EST; length=647bp
AAAACACTCATGCTCCATCTGGAGAACCACGCTGCTGCCTCTGAGGTCAG
AGTTATAATTTCAGAATCTAATCAATCTAACTTCCCAGCATTTGTTGGAA
TGGCTGGTTGTTGTTGAGTAAAGCAATGTATATTTCCACCTCCCAAAACA
ATTTCCCTTGCTCTTTCAATTCCTACCACTTCATACTTAGGAAAGGCTTG
AAACAGGACACCAACAGCTTCACCGTCCCACTTTTTGTCCCCAAACTGGG
GTGCGATGATTCCTCCATTTGCAATGTAAAAATTCACATATGAAGCAGCA
AGTCTTGTACCCGCAAGTCTTGGTTTAGCCTCACCATCCTGATTAAGTCC
AGCAGCTTCTTCTTCTGTCATATAAAGTGGCCCTGGTACATGAAGTTTAA
TTATTTGTAATTTCCGACCTCTGGCATCAGTAGCATCAGAGAGAATAGTC
AACGCCTCCACAGATCGTTCGTACTGAGGATCTGTTTTATCATCAGTCCA
AGACAGTAACACCACACCAGGCTTTGAAAAACAGCACATATTGTCAATAT
GGCCATTAGTATCATCATCACCAAATAATCCACGAGGCAACCATATAATC
TTCATGACTCCAAGATATGCCTTAAGTTCGTTCTCTATTTGTCCTTT
back to top