CB290856

Overview
NameCB290856
Unique NameCB290856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_MYCMS (Putative agmatine deiminase OS=Mycoplasma mycoides subsp. mycoides SC GN=aguA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.696e-47
Identity = 97/181 (53.59%), Postives = 127/181 (70.17%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K QIE  LK Y GV K+IWLP G++ +D+TNGH+DN+     PG V+L+WTDD TDPQYERS  A  IL++  DA+GRK+++ KLH PGPL++T+EEA G++   +   R    R+ ASY N+YIAN  II P FGD K+D  AV  L   +P +++  +  AREI+LGGGNIHC TQQQP
Sbjct:  185 KEQIEENLKEYCGVEKVIWLPLGVY-NDETNGHVDNLLNVVSPGHVVLTWTDDTTDPQYERSKLAYDILTNTLDAKGRKIKVTKLHQPGPLFITKEEAEGIDV-CDTMSREPEQRMPASYANYYIANNAIILPIFGD-KYDDLAVKTLQSVYPNHKIETV-MAREILLGGGNIHCITQQQP 361          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHESR (Putative agmatine deiminase OS=Shewanella sp. (strain MR-7) GN=aguA PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.827e-47
Identity = 100/182 (54.95%), Postives = 125/182 (68.68%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE  L+ YL V + IWL  G++ D+ T+GHIDNMCCF++PG V+L WTDD+TDPQY RS  AL +L +  DA+GRKL+I  L  PGPLY TEEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L   FP++++VG+  AREI+LGGGNIHC TQQ P+
Sbjct:  191 KEQIEALLRDYLNVKQFIWLEEGVYMDE-TDGHIDNMCCFARPGEVVLHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCTEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQDIFPEHKIVGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHEFN (Putative agmatine deiminase OS=Shewanella frigidimarina (strain NCIMB 400) GN=aguA PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.304e-47
Identity = 99/180 (55.00%), Postives = 123/180 (68.33%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            QIE  L  YL V + IWLP G++ D+ T+GHIDN+CCF++PG V+L WTDD++DPQY RS  AL IL +  DA+GRKL +  +  PGPLY TEEEA G+  +G   PR AG RLA SY NF I N  I+ P   D   D  A   L + FP+YE+VG+  AREI+LGGGNIHC TQQ P+
Sbjct:  193 QIEALLAEYLNVKQFIWLPDGVYMDE-TDGHIDNLCCFARPGEVVLHWTDDQSDPQYPRSKAALDILQNTVDAQGRKLTVHLIPQPGPLYCTEEEAQGV-AEGTGVPRTAGERLAGSYANFLITNNRIVFPLL-DPVTDDIAAQKLQEIFPEYEIVGVP-AREILLGGGNIHCITQQIPS 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHESW (Putative agmatine deiminase OS=Shewanella sp. (strain W3-18-1) GN=aguA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.075e-46
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE+ L+ YL V + IWL  G++ D+ T+GHIDNM CF++PG V+L WTDD+TDPQY RS  AL +L +  DA+GRKL+I  L  PGPLY +EEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP++E+VG+  AREI+LGGGNIHC TQQ PA
Sbjct:  191 KEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMSCFARPGEVILHWTDDETDPQYPRSKAALEVLQNTVDAKGRKLKIHLLPQPGPLYCSEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP-AREILLGGGNIHCITQQIPA 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SHEPC (Putative agmatine deiminase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=aguA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.075e-46
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE+ L+ YL V + IWL  G++ D+ T+GHIDNM CF++PG V+L WTDD+TDPQY RS  AL +L +  DA+GRKL+I  L  PGPLY +EEE+ G+  +G   PR AG RLA SYVNF I N  I+ P   D   D  A   L + FP++E+VG+  AREI+LGGGNIHC TQQ PA
Sbjct:  191 KEQIEDLLRDYLNVKQFIWLQDGVYMDE-TDGHIDNMSCFARPGEVILHWTDDETDPQYPRSKAALEVLQNTVDAKGRKLKIHLLPQPGPLYCSEEESKGVT-EGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP-AREILLGGGNIHCITQQIPA 368          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA2_LISMF (Putative agmatine deiminase 2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=aguA2 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.649e-45
Identity = 97/181 (53.59%), Postives = 122/181 (67.40%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K +IE  LK Y  V K+IWL  G + D+ TNGH+DN+  F  PG V+LSWTD+K+DPQYE S E   IL++ TDA+GR   I KLH P P+ +T+ E+ G+       PR AG RLAASYVN+Y ANG II P F D K D +A  +L Q +P  ++VGI +AREI+LGGGNIHC TQ  P
Sbjct:  185 KIEIEQTLKKYFHVQKVIWLKHGFYLDE-TNGHVDNIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANQTDAKGRTFMIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILLGGGNIHCITQHLP 362          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_VIBPA (Putative agmatine deiminase OS=Vibrio parahaemolyticus GN=aguA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.459e-45
Identity = 91/182 (50.00%), Postives = 125/182 (68.68%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            K QIE +LK YLG+ KIIWLP GLF +D+T+GH+DN+     PG V+LSWTDD +DPQY  S +A  +L    DA+GR+++I++L +PGPL+ +E EA G++       R AG RL+ASY NF I NG +  P   D+  D  A+ +L  A P+Y+++ I  +RE++LGGGNIHC TQQ PA
Sbjct:  183 KAQIEEQLKVYLGIEKIIWLPNGLF-NDETDGHVDNLMHVIAPGKVVLSWTDDPSDPQYALSRQAEQVLKSQHDAKGREIEIVRLPLPGPLHYSEREANGIDA-SSGMSRQAGERLSASYANFLIVNGHVFLPML-DEDTDAIAIDILQNAMPEYQIIAIP-SREVLLGGGNIHCITQQIPA 360          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_SELRU (Putative agmatine deiminase OS=Selenomonas ruminantium GN=aguA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.928e-44
Identity = 98/184 (53.26%), Postives = 123/184 (66.85%), Query Frame = -1
Query:   99 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVP-GPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPAI 647
            K QIE  L  YLG  K+IWLPRG+  +D+TN H+DN+  F +PG VLL+WTDDK DPQYE S   L +L  ATDARGRK  I KL +P  P+ +T EEA     +     R  G RLAASYVNFY+ NG +I PQFGD + D EA  +L + FP+ +VV +  A+ +++GGGN HC TQQ PAI
Sbjct:  189 KEQIEAMLLKYLGAEKVIWLPRGIH-NDETNEHVDNVFAFVRPGEVLLAWTDDKDDPQYELSQADLEVLESATDARGRKFVIHKLPIPQEPVCITAEEADSFTFEEGEDRREPGERLAASYVNFYLCNGKVILPQFGD-EMDIEAQRILGKCFPERKVVPLP-AKAVIVGGGNFHCLTQQIPAI 369          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA2_LISMO (Putative agmatine deiminase 2 OS=Listeria monocytogenes GN=aguA2 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.995e-44
Identity = 95/181 (52.49%), Postives = 121/181 (66.85%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K +IE  LK Y    K+IWL  G + D+ TNGH+DN+  F  PG V+LSWTD+K+DPQYE S E   IL++ TDA+GR   I KLH P P+ +T+ E+ G+       PR AG RLAASYVN+Y ANG II P F D K D +A  +L + +P  ++VGI +AREI+LGGGNIHC TQ  P
Sbjct:  185 KIEIEQTLKKYFHAQKVIWLKHGFYLDE-TNGHVDNIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANKTDAKGRTFIIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEKLYPDRKIVGI-KAREILLGGGNIHCITQHLP 362          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_MARMS (Putative agmatine deiminase OS=Marinomonas sp. (strain MWYL1) GN=aguA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.229e-43
Identity = 94/181 (51.93%), Postives = 126/181 (69.61%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K  IE+ LK YL V KIIWL  GL+ +D+TNGH+DN+    +PGVV L+  +D  DPQY  S  A+ +LS A DA+GR L+IIKL +PGPL+++E+EA  L +  ++  R  G RLAASY NF I N  I+ P FG+K  D +A  +L +AFP+++V+G+  AR I+LGGGNIHC TQQ P
Sbjct:  185 KEDIEDLLKVYLNVEKIIWLKDGLY-NDETNGHVDNIMHVIRPGVVALTDCEDSNDPQYAISKAAIKVLSQAIDAKGRTLEIIKLPMPGPLFVSEDEAKNLLK-SDSMNRQVGERLAASYANFLITNNSIVFPTFGEKT-DEQAKEILQKAFPEHKVIGV-YARNILLGGGNIHCITQQVP 361          
The following BLAST results are available for this feature:
BLAST of CB290856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
AGUA_MYCMS3.696e-4753.59Putative agmatine deiminase OS=Mycoplasma mycoides... [more]
AGUA_SHESR4.827e-4754.95Putative agmatine deiminase OS=Shewanella sp. (str... [more]
AGUA_SHEFN6.304e-4755.00Putative agmatine deiminase OS=Shewanella frigidim... [more]
AGUA_SHESW1.075e-4654.95Putative agmatine deiminase OS=Shewanella sp. (str... [more]
AGUA_SHEPC1.075e-4654.95Putative agmatine deiminase OS=Shewanella putrefac... [more]
AGUA2_LISMF2.649e-4553.59Putative agmatine deiminase 2 OS=Listeria monocyto... [more]
AGUA_VIBPA3.459e-4550.00Putative agmatine deiminase OS=Vibrio parahaemolyt... [more]
AGUA_SELRU2.928e-4453.26Putative agmatine deiminase OS=Selenomonas ruminan... [more]
AGUA2_LISMO4.995e-4452.49Putative agmatine deiminase 2 OS=Listeria monocyto... [more]
AGUA_MARMS4.229e-4351.93Putative agmatine deiminase OS=Marinomonas sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02aa04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02aa04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290856 ID=CB290856; Name=CB290856; organism=Citrus sinensis; type=EST; length=647bp
AAAACACTCATGCTCCATCTGGAGAACCACGCTGCTGCCTCTGAGGTCAG
AGTTATAATTTCAGAATCTAATCAATCTAACTTCCCAGCATTTGTTGGAA
TGGCTGGTTGTTGTTGAGTAAAGCAATGTATATTTCCACCTCCCAAAACA
ATTTCCCTTGCTCTTTCAATTCCTACCACTTCATACTTAGGAAAGGCTTG
AAACAGGACACCAACAGCTTCACCGTCCCACTTTTTGTCCCCAAACTGGG
GTGCGATGATTCCTCCATTTGCAATGTAAAAATTCACATATGAAGCAGCA
AGTCTTGTACCCGCAAGTCTTGGTTTAGCCTCACCATCCTGATTAAGTCC
AGCAGCTTCTTCTTCTGTCATATAAAGTGGCCCTGGTACATGAAGTTTAA
TTATTTGTAATTTCCGACCTCTGGCATCAGTAGCATCAGAGAGAATAGTC
AACGCCTCCACAGATCGTTCGTACTGAGGATCTGTTTTATCATCAGTCCA
AGACAGTAACACCACACCAGGCTTTGAAAAACAGCACATATTGTCAATAT
GGCCATTAGTATCATCATCACCAAATAATCCACGAGGCAACCATATAATC
TTCATGACTCCAAGATATGCCTTAAGTTCGTTCTCTATTTGTCCTTT
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