CB290861

Overview
NameCB290861
Unique NameCB290861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.821e-64
Identity = 125/161 (77.64%), Postives = 130/161 (80.75%), Query Frame = -3
Query:   63 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EKFPA 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVA+GLARR IVQVSY IGVP+PLSVFVD+YGTGKIPDKEILKIVKE FDFRPG +SIN DLKRGGNGRF KTAAYG FGRDDPDF WE+V P K EK PA
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMMSINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWEKIPA 393          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.378e-64
Identity = 123/158 (77.85%), Postives = 130/158 (82.28%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA +VRQA KSIVA+GLARRCIVQVSY IGVP+PLSVFVDSYGTGKIPD+EIL+IVKENFDFRPG I+IN DLKRGGN RFLKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  234 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 391          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.378e-64
Identity = 126/161 (78.26%), Postives = 130/161 (80.75%), Query Frame = -3
Query:   63 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EKFPA 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVDSYGTGKIPDKEIL+IVKE+FDFRPG ISIN DLKRGGNGRFLKTAAYG FGRDD DF WE+V P K  K  A
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.378e-64
Identity = 124/158 (78.48%), Postives = 129/158 (81.65%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVA+GLARRC+VQVSY IGVP+PLSVFVDSYGTG+IPDKEIL IVKENFDFRPG I+IN DLKRGGNGRFLKTA YG FGRDDPDF WEIV P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPDFTWEIVKPLKWEK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.106e-64
Identity = 125/158 (79.11%), Postives = 129/158 (81.65%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVAS LARRCIVQVSY IGVP+PLSVFVD+YGTGKIPDKEILKIVKENFDFRPG ISIN DLKRGGN RFLKTAAYG FGR+DPDF WE+V P K EK
Sbjct:  234 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 391          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.106e-64
Identity = 124/158 (78.48%), Postives = 129/158 (81.65%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVA+GLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPDKEIL IVKENFDFRPG ISIN DL RGGNGRFLKTAAYG FGRDDPDF WE+V P K +K
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.056e-64
Identity = 124/157 (78.98%), Postives = 129/157 (82.17%), Query Frame = -3
Query:   75 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*E 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPD+EILKIVKENFDFRPG +SIN DLKRGGNGRFLKTAAYG FGRDD DF WE+V P K E
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKWE 389          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.056e-64
Identity = 124/158 (78.48%), Postives = 129/158 (81.65%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPDKEIL IVKE FDFRPG I+I+ DLKRGGNGRFLKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKEKFDFRPGMIAISLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKSEK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 5.297e-64
Identity = 122/158 (77.22%), Postives = 129/158 (81.65%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA + RQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTG+IPDKEILKIVKENFDFRPG I IN DLK+GGNGR+LKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  236 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWEK 393          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 5.297e-64
Identity = 122/158 (77.22%), Postives = 129/158 (81.65%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA + RQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTG+IPDKEILKIVKENFDFRPG I IN DLK+GGNGR+LKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  236 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWEK 393          
The following BLAST results are available for this feature:
BLAST of CB290861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_BETVU1.821e-6477.64S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK_MEDTR2.378e-6477.85S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK2_BRAJU2.378e-6478.26S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_ELAUM2.378e-6478.48S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK_PHALU3.106e-6479.11S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK2_SOLLC3.106e-6478.48S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK_SOLBR4.056e-6478.98S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK2_POPTR4.056e-6478.48S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK1_ORYSJ5.297e-6477.22S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI5.297e-6477.22S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290861 ID=CB290861; Name=CB290861; organism=Citrus sinensis; type=EST; length=553bp
AAAAAAAATTCCACCTATATAAAAACCCATGAAAGGGCCCCAGCTCCTCC
TTGATTAATTTAAGCTGGAAATTTCTCCTACTTGGGGGGGTTAACAATCT
CCCAAGGGAAATCCGGATCATCTCTGCCAAAGGGGCCATAAGCGGCAGTC
TTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAAATTAATAGAAAT
CGTCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCT
TGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGG
TCGGGCACACCAATAACGTAAGAAACCTGAACAATGCATCTCCTGGCAAG
CCCACTTGCCACAATACTCTTAACAGCTTGCCTTACAATGGAAGCACCGC
TTCTATCAACCTTGGGAGGATCTTTCCCTGAGAAAGCCCCACCGCCGGGG
GCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGGCAGTGAGCCC
AGCATCACCGGGAGGGGCACCAATAACAAAACGGGCAGATGGGTTAAAAA
GGA
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