CB290861

Overview
NameCB290861
Unique NameCB290861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 4.802e-57
Identity = 111/151 (73.51%), Postives = 120/151 (79.47%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VASGLARRC+VQVSY IGV +PLSVFVD+Y TGKI DK+IL ++KENFDFRPG I+IN DLKRGGN R+ KTAAYG FGRDDPDF WE V
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETV 383          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 8.192e-57
Identity = 111/151 (73.51%), Postives = 119/151 (78.81%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VASGLARRCIVQVSY IGV +PLSVFVD+Y TG IPDK+IL ++KENFDFRPG +SIN DL RGGN R+ KTAAYG FGRDDPDF WE V
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETV 383          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 8.192e-57
Identity = 111/151 (73.51%), Postives = 119/151 (78.81%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VASGLARRCIVQVSY IGV +PLSVFVD+Y TG IPDK+IL ++KENFDFRPG +SIN DL RGGN R+ KTAAYG FGRDDPDF WE V
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETV 383          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.070e-56
Identity = 111/151 (73.51%), Postives = 119/151 (78.81%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VASGLARRCIVQVSY IGV +PLSVFVD+Y TG IPDK+IL ++KENFDFRPG +SIN DL RGGN R+ KTAAYG FGRDDPDF WE V
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNYRYQKTAAYGHFGRDDPDFTWETV 383          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.070e-56
Identity = 111/151 (73.51%), Postives = 119/151 (78.81%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VASGLARRCIVQVSY IGV +PLSVFVD+Y TG IPDK+IL ++KENFDFRPG +SIN DL RGGN R+ KTAAYG FGRDDPDF WE V
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETV 383          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 5.310e-56
Identity = 109/151 (72.19%), Postives = 119/151 (78.81%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VASGLARRC+VQVSY IGV +PLSVFVD++ TGKIPDK+IL ++KENFDFRPG I+IN DLKRGGN R+ KTAA G  GRDDPDF WE V
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETV 383          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 6.935e-56
Identity = 109/151 (72.19%), Postives = 118/151 (78.15%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VASGLARRCIVQVSY IGV +PLSVFVD+Y TG IP K++L ++KENFDFRPG +SIN DL RGGN R+ KTAAYG FGRDDPDF WE V
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETV 383          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.442e-55
Identity = 109/155 (70.32%), Postives = 119/155 (76.77%), Query Frame = -3
Query:   81 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KS+VA+GLARRCIVQVSY IGV +PLSVFVD+Y TG IPDK+IL ++KENFDFRPG I+IN DL RGGN R+ KTAAYG FGRD+ DF WE V   K
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGEGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.231e-54
Identity = 105/151 (69.54%), Postives = 117/151 (77.48%), Query Frame = -3
Query:   93 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIV 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA I RQA KS+VASGLA+RC+VQVSY I V +PLSVFVD+YGTG +PD EILK+++++FDFRPG I  N DLKRGGN R+ KTAAYG FGRDDPDF WE V
Sbjct:  236 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETV 386          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.389e-48
Identity = 101/154 (65.58%), Postives = 110/154 (71.43%), Query Frame = -3
Query:   87 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPD-FPWEIVNP 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA I RQ  KSIVA+GLARR + Q+SY IGV  PLS+ VD+YG+GKIPD EIL+ VKE FDFR G I  + DLKRGGN R+  TAAYG FGRDD D F WE V P
Sbjct:  232 NPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVP 385          
The following BLAST results are available for this feature:
BLAST of CB290861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_ACTCH4.802e-5773.51S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK1_TOBAC8.192e-5773.51S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PETHY8.192e-5773.51S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK3_SOLLC1.070e-5673.51S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK2_SOLTU1.070e-5673.51S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK3_CATRO5.310e-5672.19S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_PETHY6.935e-5672.19S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK2_TOBAC3.442e-5570.32S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK_CHLRE2.231e-5469.54S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTTA2.389e-4865.58S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290861 ID=CB290861; Name=CB290861; organism=Citrus sinensis; type=EST; length=553bp
AAAAAAAATTCCACCTATATAAAAACCCATGAAAGGGCCCCAGCTCCTCC
TTGATTAATTTAAGCTGGAAATTTCTCCTACTTGGGGGGGTTAACAATCT
CCCAAGGGAAATCCGGATCATCTCTGCCAAAGGGGCCATAAGCGGCAGTC
TTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAAATTAATAGAAAT
CGTCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCT
TGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGG
TCGGGCACACCAATAACGTAAGAAACCTGAACAATGCATCTCCTGGCAAG
CCCACTTGCCACAATACTCTTAACAGCTTGCCTTACAATGGAAGCACCGC
TTCTATCAACCTTGGGAGGATCTTTCCCTGAGAAAGCCCCACCGCCGGGG
GCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGGCAGTGAGCCC
AGCATCACCGGGAGGGGCACCAATAACAAAACGGGCAGATGGGTTAAAAA
GGA
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