CB290926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_ASHGO (ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii GN=DBP5 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.681e-37 Identity = 85/175 (48.57%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 ++P S +FE+L L+PELLKGLY MKFQKPSKIQ +LP++L P RN+IAQ+++G+GKT F L MLSRVD + A QA+C+ P+R LA Q LEV+++MGK T I S+ VP K + A +++GTPGT+ M K + ++K V DEAD+MLD+ G D Sbjct: 72 NSPLYSVKSFEELGLAPELLKGLYA-MKFQKPSKIQERALPLLLYNPPRNMIAQSQSGTGKTAAFSLTMLSRVDVAVPATQAICLAPSR-LARQTLEVIQEMGKFTKIASQLIVPDS------YEKNKAINAHIIVGTPGTVLDLMRRKMIQLGKVKTFVLDEADNMLDKQGLGD 238
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_YARLI (ATP-dependent RNA helicase DBP5 OS=Yarrowia lipolytica GN=DBP5 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36 Identity = 92/237 (38.82%), Postives = 134/237 (56.54%), Query Frame = 1 Query: 97 ANTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGD-----------------------TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEA 738 A E K + DV+ ++ KKV K D+ ED+ ++ + +P SA FEDL L LLKGLY MKF KPSKIQ +LP++L+ P N+I Q+++G+GKT F L MLSRVDPNLKA Q +C+ P+RELA Q L+V+ +M K T IT+ VP + + VT+Q+++GTPG++ + K++ +K+ V DEAD+M+D + Sbjct: 26 AKVEEVKEDDKKDVKEELNEDDKKVAKEDDKKEDAKEESKEDAEENNLIQTEYEVRVKLADLQADPNSPLYSAKRFEDLGLDENLLKGLYA-MKFNKPSKIQEKALPLLLSDPPHNMIGQSQSGTGKTGAFSLTMLSRVDPNLKAVQCICLAPSRELARQTLDVVDEMKKFTDITTHLIVPEST------ERGQKVTSQILVGTPGSVAGLLQKKQIDAKHVKVFVLDEADNMVDSS 255
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_PICGU (ATP-dependent RNA helicase DBP5 OS=Pichia guilliermondii GN=DBP5 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36 Identity = 82/172 (47.67%), Postives = 112/172 (65.12%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAG 741 ++P S +FE+L LSPELLKGLY MKF KPSKIQ +LP++++ P +N+I Q+++G+GKT F L MLSRVD N Q +C+ PTRELA Q LEV+ MGK T +T++ VP + K A +V+GTPGT+ + K L ++K+ V DEAD+MLD G Sbjct: 85 NSPLYSVKSFEELGLSPELLKGLYA-MKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDVNDPNTQCICLSPTRELARQTLEVITTMGKFTKVTTQLVVPQ------AMEKNQGTQAHIVVGTPGTLLDMIKRKLLRTGKVKVFVLDEADNMLDGQG 249
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_DEBHA (ATP-dependent RNA helicase DBP5 OS=Debaryomyces hansenii GN=DBP5 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.775e-34 Identity = 88/222 (39.64%), Postives = 129/222 (58.11%), Query Frame = 1 Query: 97 ANTSEDKSTAELDVEGLTIDESKKV-NKFLDEAEDSSIKTV---TTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 A+T E K DV+ T E ++ + + + + +K ++P S +FE+L LS ELLKGLY MKF KPSKIQ +LP++++ P +N+I Q+++G+GKT F L MLSRVD + Q +C+ P RELA Q LEV+ M K T ITS+ VP + + A V++GTPGT+ + K + S++K+ V DEAD+ML+ G D Sbjct: 52 ASTEESKPA---DVKDATKSEEQEAESNLIKSSYEVKVKLADLQADPNSPLYSVKSFEELGLSSELLKGLYA-MKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDESDPNTQCICLAPARELARQTLEVITTMSKFTKITSQLIVPD------AMQRGQSTCAHVLVGTPGTLLDLIRRKLINTSKVKVFVLDEADNMLESQGLGD 263
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DDX19_DICDI (ATP-dependent RNA helicase ddx19 OS=Dictyostelium discoideum GN=helC PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 82/173 (47.40%), Postives = 113/173 (65.32%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGI-----TSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 ++P S TFE+L L PELLKG+Y M + KPSKIQ +LP+I+ P NLIAQ+++G+GKT F LGML+ VDP++ APQA+CI PT+ELA+Q EV+ K+G+ + I SE VP + TN QV+IGTPG I + + K+L LK++V DEAD ++ Sbjct: 63 NSPLYSVKTFEELGLKPELLKGVYA-MGYNKPSKIQEAALPIIIQSP-NNLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN------------QVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIV 221
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_USTMA (ATP-dependent RNA helicase DBP5 OS=Ustilago maydis GN=DBP5 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 74/170 (43.53%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDE 735 ++P SA +FE L L LLKG+Y MK+QKPSKIQ +LP++L P +N+I Q+++G+GKT F+L MLSR+D +L+ PQA+ + P+RELA Q ++V R M K T +T+ +P + + + +TAQ++IGTPG + +K + + +K+ V DEAD+MLD+ Sbjct: 57 NSPLYSAKSFEALGLHENLLKGIYA-MKYQKPSKIQEKALPLLLQNPPKNMIGQSQSGTGKTAAFILTMLSRIDYDLQKPQAIALAPSRELARQIMDVARTMSKFTNVTTCLCLPDE------VKRGEKITAQLIIGTPGKTFDMIKSKGIDTAAIKVFVLDEADNMLDQ 219
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DDX25_MOUSE (ATP-dependent RNA helicase DDX25 OS=Mus musculus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33 Identity = 89/218 (40.83%), Postives = 124/218 (56.88%), Query Frame = 1 Query: 106 SEDKSTAELDVEGLTIDE--SKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKL-GFSRLKILVYDEADHMLDEAGFRD 750 +ED E DV L + +K + + L E+ +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + E I + VT Q++IGTPGT+ W +KL +++++ V DEAD M+D GF D Sbjct: 49 TEDDDDDEDDVVDLAANSLLNKLIRQSLIESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFC-VDVEVMYAIRGNR---IPRGTEVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSD 261
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33 Identity = 81/175 (46.29%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 229 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKL-GFSRLKILVYDEADHMLDEAGFRD 750 +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + N +P + VT Q+VIGTPGT+ W +KL +++++ V DEAD M+D GF D Sbjct: 91 SPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKF--CVDVQVMYAIRGNRIP--RGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFED 260
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DDX25_RAT (ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.233e-33 Identity = 91/220 (41.36%), Postives = 125/220 (56.82%), Query Frame = 1 Query: 100 NTSEDKSTAELDVEGLTIDE--SKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKL-GFSRLKILVYDEADHMLDEAGFRD 750 NT ED E DV L + +K + + L E+ +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL ML+RV+ PQ LC+ PT ELA+Q V+ +MGK + E I + VT Q+VIGTPGT+ W +KL +++++ V DEAD M+D GF D Sbjct: 48 NTEEDDD--EDDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFC-VDVEVMYAIRGNR---IPRGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSD 260
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DDX25_HUMAN (ATP-dependent RNA helicase DDX25 OS=Homo sapiens GN=DDX25 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.597e-32 Identity = 84/218 (38.53%), Postives = 124/218 (56.88%), Query Frame = 1 Query: 100 NTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW-MSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 N +++ +L L +K +++ L E+ +P S TFE+L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + N +P + +T Q++IGTPGT+ W K + +++++ V DEAD M+D GF D Sbjct: 51 NEDDEEDVVDLAANSLL---NKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKF--CVDVQVMYAIRGNRIP--RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSD 260 The following BLAST results are available for this feature:
BLAST of CB290926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290926 ID=CB290926; Name=CB290926; organism=Citrus sinensis; type=EST; length=755bpback to top |