CB290926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DD19A_MOUSE (ATP-dependent RNA helicase DDX19A OS=Mus musculus GN=Ddx19a PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32 Identity = 79/176 (44.89%), Postives = 113/176 (64.20%), Query Frame = 1 Query: 229 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRD 750 +P S +FE+L L P+LL+G+Y M F +PSKIQ +LPM+L P +NLIAQ+++G+GKT FVL MLSRV+P + PQ LC+ PT ELA+Q +V+ +MGK H + AV + + + V+ Q+VIGTPGT+ W S K + ++K+ V DEAD M+ G +D Sbjct: 85 SPLYSVKSFEELRLKPQLLQGVYA-MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNK-----LERGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQD 254
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DD19A_HUMAN (ATP-dependent RNA helicase DDX19A OS=Homo sapiens GN=DDX19A PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 77/177 (43.50%), Postives = 115/177 (64.97%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRD 750 ++P S +FE+L L P+LL+G+Y M F +PSKIQ +LPM+L P +NLIAQ+++G+GKT FVL MLSRV+P+ + PQ LC+ PT ELA+Q +V+ +MGK + + AV + + + ++ Q+VIGTPGT+ W S K + ++K+ V DEAD M+ G +D Sbjct: 84 NSPLYSVKSFEELRLKPQLLQGVYA-MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNK-----LERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQD 254
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_PHANO (ATP-dependent RNA helicase DBP5 OS=Phaeosphaeria nodorum GN=DBP5 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 87/225 (38.67%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 106 SEDKSTAELDVEG---------LTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +E + A+ V+G LT E K K D D + P SA +FE+L LS ELLKG+ M F+KPSKIQ +LP++L P N+IAQ+++G+GKT F L +LSR+D + PQA+ + P+RELA Q L V+ MG+ G+ + A+P P + + A V++GTPGT+++ + + + +KILV DEAD+MLD+ G D Sbjct: 16 AEQSTVAQAQVDGSGEPANGSPLTETEYKVEVKLADMQADPN--------NPLYSAQSFEELQLSEELLKGVR-NMNFRKPSKIQEKALPLLLMNPPTNMIAQSQSGTGKTAAFSLNILSRIDLSRNEPQAIALAPSRELARQILGVITHMGQFMEGLKTMAAIPD------PTKRNQRLDAHVLVGTPGTVQEQLKRRLIKSDSIKILVLDEADNMLDQQGMGD 225
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_BOTFB (ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp5 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 77/176 (43.75%), Postives = 111/176 (63.07%), Query Frame = 1 Query: 229 TPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +P S TFE L + +LKGLY M F+KPSKIQ +LP++L P N+IAQ+++G+GKT FV+ +LSR+D PQALC+ P+RELA Q V+R +G+ G+T + A+P + + V A VV+GTPGT+ + + + S++KIL DEAD+MLD+ G D Sbjct: 63 SPLYSVETFEQLGIDASILKGLYA-MNFKKPSKIQEKALPLLLRNPPTNMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTVQAAIPG------AVERNAKVNAMVVVGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGD 231
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_ASPOR (ATP-dependent RNA helicase dbp5 OS=Aspergillus oryzae GN=dbp5 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 + P S +FEDL L P +L+GL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL LSR+D + K PQAL + PTRELA Q + V++ MG+ G+ AVP D+ S+ + + VV+GTPGT+ + + + ++LK+LV DEAD+MLD+ G D Sbjct: 71 NNPLYSVKSFEDLGLDPRILQGLSA-MNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAVPADTN-----SRHSKIESSVVVGTPGTVMDMIRKRVMVANKLKVLVLDEADNMLDQQGLGD 244
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DD19A_BOVIN (ATP-dependent RNA helicase DDX19A OS=Bos taurus GN=DDX19A PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32 Identity = 77/177 (43.50%), Postives = 113/177 (63.84%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRD 750 ++P S +FE+L L P+LL+G+Y M F +PSKIQ +LPM+L P +NLIAQ+++G+GKT FVL MLSRV+P + PQ LC+ PT ELA+Q +V+ +MGK H + AV + + + ++ +VIGTPGT+ W S K + ++K+ V DEAD M+ G +D Sbjct: 84 NSPLYSVKSFEELRLKPQLLQGVYA-MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNK-----LERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQD 254
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_NEOFI (ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp5 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32 Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 + P S FEDL L P +LKGL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL LSRVD + K PQAL + PTRELA Q L V++ MG+ G+ AVPTD S+ + +V+GTPGT+ + + ++LK+LV DEAD+MLD+ G D Sbjct: 70 NNPLYSVKNFEDLGLDPRILKGLS-NMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAVPTDRD-----SRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNMLDQQGLGD 243
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_ASPFU (ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus GN=dbp5 PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32 Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 + P S FEDL L P +LKGL M F+KPSKIQ +LP++L P +NL+ Q+++G+GKT FVL LSRVD + K PQAL + PTRELA Q L V++ MG+ G+ AVPTD S+ + +V+GTPGT+ + + ++LK+LV DEAD+MLD+ G D Sbjct: 70 NNPLYSVKNFEDLGLDPRILKGLS-SMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAVPTDRD-----SRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNMLDQQGLGD 243
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_MAGGR (ATP-dependent RNA helicase DBP5 OS=Magnaporthe grisea GN=DBP5 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.198e-31 Identity = 78/174 (44.83%), Postives = 117/174 (67.24%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL-KAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAG 741 D+P +S ++F +L L ++ GL + M F+KPSKIQA +LP++L+ P RN+IAQ+++G+GKT FV+ +LSRVD N PQAL + P+RELA Q V++ +G+ TG+ + A+P IS+ V A VV+GTPGT+ + ++ S+LK+LV DEAD+MLD+ G Sbjct: 89 DSPLSSISSFSELGLPQGIIDGL-LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPG------AISRETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQG 255
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.750e-31 Identity = 76/177 (42.94%), Postives = 114/177 (64.41%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRD 750 ++P S +FE+L L P+LL+G+Y M F +PSKIQ +LP++L P +NLIAQ+++G+GKT FVL MLS+V+P K PQ LC+ PT ELA+Q +V+ +MGK + + AV + + + ++ Q+VIGTPGT+ W S K + ++K+ V DEAD M+ G +D Sbjct: 85 NSPLYSVKSFEELRLKPQLLQGVYA-MGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNK-----LERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQD 255 The following BLAST results are available for this feature:
BLAST of CB290926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290926 ID=CB290926; Name=CB290926; organism=Citrus sinensis; type=EST; length=755bpback to top |