CB290926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_NEUCR (ATP-dependent RNA helicase dbp-5 OS=Neurospora crassa GN=dbp-5 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28 Identity = 83/224 (37.05%), Postives = 134/224 (59.82%), Query Frame = 1 Query: 94 TANTSEDKSTAELDVEGLTIDESKK---VNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +A SE+ E + +I+ES+ N++ E + S ++ T ++P S ++F++L L + +GL + + F+KPSK+Q LP++L+ P RN+IAQ+++G+GKT FVL +LSR+D PQAL + P+RELA Q V++ +G+ + E A+P IS+ V VV+GTPGT+ + ++ S+LK+LV DEAD+MLD+ G D Sbjct: 25 SAPASEEPKAPENET---SIEESQSNLVKNEYEVEIKLSDLQNDT--ESPLYSVSSFDELGLPEAVNRGL-LAINFKKPSKVQEKCLPLMLSDPPRNMIAQSQSGTGKTAAFVLTVLSRIDLSKPHQPQALLLAPSRELARQIQTVVQTIGQFCENLIVEAAIPG------AISRETGVRGSVVVGTPGTVMDLVKRRQFDISQLKVLVIDEADNMLDQQGLGD 236
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T TFED L ELL G++ E F+KPS IQ ++P+ +T R+++A+A+NG+GKT FV+ L +V P L QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R T +++GTPG + S K S + + DEAD ML Sbjct: 37 TDDVLNTKGNTFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML 201
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T TFED L ELL G++ E F+KPS IQ ++P+ +T R+++A+A+NG+GKT FV+ L +V P L QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R T +++GTPG + S K S + + DEAD ML Sbjct: 37 TDDVLNTKGNTFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML 201
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DBP5_COCIM (ATP-dependent RNA helicase DBP5 OS=Coccidioides immitis GN=DBP5 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27 Identity = 81/233 (34.76%), Postives = 132/233 (56.65%), Query Frame = 1 Query: 100 NTSEDKSTAELD---------VEGLTIDESKKVNKFLDEAEDSSIKTV---TTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD---PNLKAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +T +K AE D V+G + E ++ ++ D D ++K + P S +FE+L L+ + GL +M F++PSKIQ +LP+++ P N+IAQ+++G+GKT FVL +LSR++ K+PQAL + P+RELA Q + V++ MG G+ AVP + +++ V A +V+GTPGT++ + + L++LV DEAD+MLD+ G D Sbjct: 33 STEAEKPAAEDDSGKGPSIPQVDGAS--EDQRGSELQDSEFDVNVKLSDLQADPNNPLYSIKSFEELGLAEPIQMGLS-KMNFRRPSKIQERALPLLMANPPTNMIAQSQSGTGKTAAFVLNILSRLELTPEKQKSPQALVLAPSRELARQIVGVIQAMGTFVEGLFVATAVPME------MNRNQRVEASIVVGTPGTVQDLIKKRLFNTQHLRVLVLDEADNMLDQQGLGD 256
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27 Identity = 70/170 (41.18%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T +FED L ELL G++ E F+KPS IQ ++P+ +T R+++A+A+NG+GKT FV+ L ++ P L QAL + PTRELA+Q +V+R +G+H G++ C V T TN R T V++GTPG + S K S + V DEAD ML Sbjct: 22 TDDVLNTKGNSFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVS--CMVTTGGTNLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML 186
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DDX19_DROME (DEAD-box helicase Dbp80 OS=Drosophila melanogaster GN=Dbp80 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27 Identity = 85/239 (35.56%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 97 ANTSEDKSTAELDVEGLTIDESKKVNKFLDEAEDSS----IKTVTTG---------------DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW-MSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 A SED+ ++L V+ L +D D A+ + IK + G ++P S TFE L+L LLKG+Y M F PSKIQ +LP +L P +N+IAQ+++G+GKT FVL MLSRV+ L PQ LC+ PT ELAIQ EV +MG+ I AV + + + + ++IGTPG + W + + ++ + V DEAD M+ G D Sbjct: 5 AKKSEDQEVSKL-VDKLNLDSKSGEETDFDVADPAETSLLIKILGKGLVNTKLSLDLQQKNPNSPLHSVKTFEALHLKASLLKGIYA-MGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEE-----VDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHD 236
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_CANAL (ATP-dependent RNA helicase DHH1 OS=Candida albicans GN=DHH1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26 Identity = 70/170 (41.18%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T +FED NL ELL G++ E F+KPS IQ S+PM L R+++A+A+NG+GKT F++ L V P L QAL + PTRELA+Q +V+R +GKH G ++C V T T+ R +++GTPG + + K + S + V DEAD ML Sbjct: 21 TEDVLNTKGKSFEDFNLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVG--TQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKML 185
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.744e-26 Identity = 70/170 (41.18%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T +FED NL ELL G++ E F+KPS IQ S+PM L R+++A+A+NG+GKT F++ L ++ P L QAL + PTRELA+Q +V+R +GKH GI +C V T T+ R V++GTPG + + S + V DEAD ML Sbjct: 21 TEDVLNTKGKSFEDFNLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGI--QCMVTTGGTSLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLSECPLFVMDEADKML 185
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 71/170 (41.76%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T TFED L ELL G++ E F+KPS IQ S+P+ L R+++A+A+NG+GKT FV+ L +V QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R T +++GTPG + S K S + + DEAD ML Sbjct: 25 TEDVLSTKGNTFEDFYLKRELLMGIF-EAGFEKPSPIQEESIPVALAG--RDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSECNLFIMDEADKML 189
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25 Identity = 71/170 (41.76%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T TFED L ELL G++ E F++PS IQ ++P+ L R+++A+A+NG+GKT FV+ L V P + QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R V++GTPG + S K S + V DEAD ML Sbjct: 20 TDDVLNTKGNTFEDFYLRRELLMGIF-EAGFERPSPIQEEAIPIALAR--RDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML 184 The following BLAST results are available for this feature:
BLAST of CB290926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290926 ID=CB290926; Name=CB290926; organism=Citrus sinensis; type=EST; length=755bpback to top |