CB290926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.803e-25 Identity = 70/170 (41.18%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T TFED L ELL G++ E F+KPS +Q S+PM L R+++A+A+NG+GKT FV+ L + P + QAL + PTRELA+Q +V+R +GKH G+ +C V T T+ R V++GTPG + S K S + V DEAD ML Sbjct: 21 TEDVLNTKGKTFEDFPLKRELLMGIF-EAGFEKPSPVQEESIPMALAG--RDILARAKNGTGKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHLGL--QCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVLDLASRKVADLSECPLFVMDEADKML 185
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.075e-25 Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T +FED L ELL G++ E F+KPS IQ ++P+ + ++++A+A+NG+GKT FV+ L +V P L QAL + PTRELA+Q +V+R +GKH GI+ C V T TN R +++GTPG + S + S + + DEAD ML Sbjct: 27 TDDVLNTKGRSFEDFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAIAG--KDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKML 191
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23 Identity = 66/170 (38.82%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R +P + QAL + PTRELA+Q +V + +GKH GI V T T R T +++GTPG I S S V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLQDDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTFVMDEADKLL 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23 Identity = 68/186 (36.56%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 193 EDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEA-GFR 747 +DS +K T+ ++ TFE +NL P+LL+G+Y F+ PS IQ+ ++ I++ +++IAQA++G+GKT F +G+L +D K QAL + PTRELA Q+ V+ +G + +T+ T K+ QVV GTPG + + + L KILV DEAD +L E GF+ Sbjct: 7 DDSKLKFKTSKKLKVSA--TFESMNLKPDLLRGIYF-YGFEYPSSIQSRAISQIISG--KDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHAC--TGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADELLGETLGFK 185
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_YARLI (ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica GN=DHH1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23 Identity = 66/170 (38.82%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T T FED L ELL G++ E F+ PS IQ ++P+ L R+++A+A+NG+GKT FV+ L +V+P + QAL + PTRELA+Q +V + +GKH GI + V T TN R T V++GTPG + S + + DEAD +L Sbjct: 19 TEDVTATKGTGFEDFFLKRELLMGIF-EAGFENPSPIQEEAIPIALAG--RDILARAKNGTGKTAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLGI--KVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLDLAGKGVADLSESPMFIMDEADKLL 183
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_PHANO (ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum GN=DHH1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.094e-22 Identity = 65/170 (38.24%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L RV+P + QAL + PTRELA+Q +V + +GKH GI V T T R +++GTPG I S + V DEAD +L Sbjct: 40 TEDVTATKGLEFEDFFIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERVNPKISKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVSTGGTGLKDDIIRLSDPVHIIVGTPGRILDLAGKGVADLSTCQTFVMDEADKLL 204
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.428e-22 Identity = 63/167 (37.72%), Postives = 99/167 (59.28%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 TFE +NL P+LLKG+Y F+ PS IQ+ ++ I+ R+ IAQA++G+GKT F +GML +D N K QAL + PTRELA+Q V++ +G + I + + T+ K+ Q+V GTPG + + ++L +K+L+ DEAD + + GF++ Sbjct: 27 TFESMNLKPDLLKGIY-GYGFEAPSAIQSRAIMQIING--RDTIAQAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMNIHTHACI--GGTHVGDDIKKLKQGQQIVSGTPGRVVDMVKRQQLSTRNIKMLILDEADELFTK-GFKE 187
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.428e-22 Identity = 67/181 (37.02%), Postives = 103/181 (56.91%), Query Frame = 1 Query: 208 KTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 K V T A TFE LNL +LL+G+Y F+KPS IQ ++ I+ R++IAQA++G+GKT F + ML +D NL+ QAL + PTRELA+Q V+ +G + ++ C T+ ++ QVV GTPG + + + L +K+L+ DE+D +L++ GF+D Sbjct: 10 KLVFESSEAVTVAPTFEALNLKEDLLRGIYA-YNFEKPSAIQQRAIIPIIRG--RDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVS--CHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK-GFKD 184
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.428e-22 Identity = 64/170 (37.65%), Postives = 93/170 (54.71%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T +FE+ L ELL G++ E F+KPS IQ S+PM L R+++A+A+NG+GKT F++ L +V L Q L + PTRELA+Q +V++ +GKH + +C V T T R +++GTPG + + FS + V DEAD ML Sbjct: 20 TEDVTKTQGKSFEEFGLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKH--LKLQCMVTTGGTLLRDDVMRLDEPVHILVGTPGRVLDLAARSIADFSECPMFVMDEADKML 184
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_NEOFI (ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.865e-22 Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q +V + +GKH GI V T T + R +++GTPG + S S V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202 The following BLAST results are available for this feature:
BLAST of CB290926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290926 ID=CB290926; Name=CB290926; organism=Citrus sinensis; type=EST; length=755bpback to top |