CB290926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_BOTFB (ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) GN=dhh1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.865e-22 Identity = 63/170 (37.06%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED ++ ELL G++ EM ++KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P Q L + PTRELA+Q +V + +G+H GI V T T R +++GTPG I S + V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFSIKRELLMGIF-EMGYEKPSPIQEEAIPVALTG--RDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHLGI--NVMVTTGGTTLRDDILRLQEPVHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLL 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_ASPFU (ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.865e-22 Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q +V + +GKH GI V T T + R +++GTPG + S S V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_ASPCL (ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.865e-22 Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q +V + +GKH GI V T T + R +++GTPG + S S V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.182e-22 Identity = 68/190 (35.79%), Postives = 108/190 (56.84%), Query Frame = 1 Query: 190 AEDSSIKTVTTG--DTPYTSAT-TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 + D ++ + G ++ Y T +F+ ++L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++DPNLKA QAL + PTRELA Q +V+ +G + EC TN K QVV+GTPG ++ + + L ++K+ + DEAD ML GF + Sbjct: 3 SNDKGLEEIPEGQIESNYDEITDSFDSMDLKPELLRGIYA-YGFERPSAIQQRAIMPIIKGS--DVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSL--ECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSR-GFTE 186
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_ASPTN (ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dhh1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.182e-22 Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q V + +GKH GI V T T + R +++GTPG + S S V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_ASPOR (ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae GN=dhh1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.182e-22 Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q V + +GKH GI V T T + R +++GTPG + S S V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_ASPNC (ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dhh1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.182e-22 Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FED + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L R++P QAL + PTRELA+Q V + +GKH GI V T T + R +++GTPG + S S V DEAD +L Sbjct: 38 TEDVTATKGLEFEDFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.427e-22 Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FE+ L +LL G++ E F+KPS IQ S+P+ LT R+++A+A+NG+GKT FV+ L R++P + Q L + PTRELA+Q +V + +GKH GI V T T R +V+GTPG I S + + DEAD +L Sbjct: 33 TEDVTNTKGLEFENFALKRDLLMGIF-EAGFEKPSPIQEESIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL 197
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNV (ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii GN=VAD1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.427e-22 Identity = 64/172 (37.21%), Postives = 95/172 (55.23%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDE 735 T D T + FED L ELL G+Y F++PS IQ ++PM LT R+++A+A+NG+GKT F++ L+R++ +L QAL + PTRELA+Q +V + +G H + + T T R +++GTPG I S G ++ I V DEAD +L E Sbjct: 27 TEDVTATQGSRFEDFGLRRELLMGIYTA-GFERPSPIQEQAIPMALTG--RDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIP-NLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCGIFVMDEADKLLSE 194
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_SCHPO (Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe GN=ste13 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22 Identity = 65/170 (38.24%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T T FED L ELL G++ E F++PS IQ S+P+ L+ R+++A+A+NG+GKT FV+ L +VD Q L + PTRELA+Q +V + +GKH + + V T T R T +V+GTPG + FS V DEAD +L Sbjct: 35 TEDVTKTRGTEFEDYYLKRELLMGIF-EAGFERPSPIQEESIPIALSG--RDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNV--KVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLL 199 The following BLAST results are available for this feature:
BLAST of CB290926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290926 ID=CB290926; Name=CB290926; organism=Citrus sinensis; type=EST; length=755bpback to top |