CB290926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 68/175 (38.86%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLK---ILVYDEADHMLDE 735 T D T FED L ELL G+Y E F++PS IQ S+P+ LT R+++A+A+NG+GKT F + +L ++D + QA+ I PTRELA+Q +V +++GKH I + V T T+ R +++GTPG I + K G LK +LV DEAD +L + Sbjct: 122 TEDVTATKGNEFEDYFLKRELLMGIY-EKGFERPSPIQEESIPIALTG--RDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKI--QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI---LDLTKKGVCVLKDCSVLVMDEADKLLSQ 288
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 64/171 (37.43%), Postives = 100/171 (58.48%), Query Frame = 1 Query: 238 TSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 T F+++ L ELL+G+Y F++PS IQA ++ ++ ++IAQA++G+GKT F + +L R+DP++KA QAL + PTRELA Q +V+ +G + I +C TN + AQVV+GTPG + ++ + +LK+ DEAD ML GF+D Sbjct: 35 TVIDNFDNMELKEELLRGVYA-YGFERPSAIQARAIVPVIKG--HDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKI--DCHACIGGTNVREDMAKLNEGAQVVVGTPGRVYDMINRRAFKTDQLKMFCLDEADEMLSR-GFKD 199
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 62/166 (37.35%), Postives = 101/166 (60.84%), Query Frame = 1 Query: 253 FEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 F+D+NL+ +LL+G++ F KPS IQ ++ I+ +++AQA++G+GKT F + L R+DP +KAPQAL + PTRELA+Q +V+ +G H I + T++V ++ AQ+V+GTPG + + +K +K+ + DEAD ML GF++ Sbjct: 25 FDDMNLNEKLLRGVF-GYGFNKPSAIQQRAIMPIIEG--NDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACI--GGTSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEML-STGFKE 183
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 63/167 (37.72%), Postives = 97/167 (58.08%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 TFE +NL P+LLKG+Y F+ PS IQ+ ++ I++ R+ IAQA++G+GKT F +GML +D K QAL + PTRELAIQ V++ +G + I + + N K+ Q+V GTPG + + + L +K+L+ DEAD + + GF++ Sbjct: 27 TFESMNLKPDLLKGIYA-YGFETPSAIQSRAIMQIISG--RDTIAQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACI--GGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTK-GFKE 187
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 62/168 (36.90%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 226 DTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 D T FED L +LL G++ E F+KPS IQ S+P+ L R+++A+A+NG+GKT FV+ L +++P + Q L + PTRELA+Q +V + +GKH GI V T T R +V+GTPG I + S + + DEAD +L Sbjct: 4 DVTNTKGLDFEDFGLKRDLLMGIF-EAGFEKPSPIQEESIPVALVG--RDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL 166
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.579e-21 Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +F+++NL PELL+G+Y F++PS IQ ++ ++ ++IAQA++G+GKT F + +L ++DP+LKA QAL + PTRELA Q +V+ +G I EC T+ K QVV+GTPG + + + L +K+ V DEAD ML GF + Sbjct: 25 SFDEMNLKPELLRGIYA-YGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSR-GFTE 185
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21 Identity = 67/173 (38.73%), Postives = 98/173 (56.65%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLK---ILVYDEADHML 729 T D T FED L +LLKG+Y E F+KPS IQ S+P+ LT +++A+A+NG+GKT F + +L ++DPN QA+ + PTRELA+Q +V +++ K+ I + V T T+ R +++GTPG I + K G LK +LV DEAD +L Sbjct: 115 TADVTATKGNEFEDYFLKRDLLKGIY-EKGFEKPSPIQEESIPIALTGS--DILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNI--QVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRI---LDLTKKGVCVLKDCAMLVMDEADKLL 279
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21 Identity = 68/190 (35.79%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 190 AEDSSIKTVTTG--DTPYTSAT-TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 + D ++ + G ++ Y T +F+ + L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++DPN+K QAL + PTRELA Q +V+ +G I EC TN K QVV+GTPG ++ + + L LK+ + DEAD ML GF + Sbjct: 3 SNDKGLEEIPEGQIESNYDEITDSFDSMELKPELLRGIYA-YGFERPSAIQQRAILPIIKG--NDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSR-GFTE 186
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21 Identity = 63/170 (37.06%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 T D T FE+ L +LL G++ E F+KPS IQ S+P+ LT R+++A+A+NG+GKT FV+ L ++P + Q L + PTRELA+Q +V + +GKH GI V T T R +V+GTPG I S + + DEAD +L Sbjct: 27 TEDVTNTKGLEFENFGLKRDLLMGIF-EAGFEKPSPIQEESIPVALTG--RDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL 191
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DEAD_KLEPN (Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21 Identity = 66/171 (38.60%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 247 TTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDD 753 TTF DL L +L+ L ++ ++KPS IQA +P +L R+++ A+ GSGKT F L +L+ +DP L+APQ L + PTRELA+Q E + + KH + A+ V + ++ P Q+V+GTPG + + L S+L LV DEAD ML GF +D Sbjct: 6 TTFADLGLKAPILEAL-TDLGYEKPSPIQAECIPHLLDG--RDVLGMAQTGSGKTAAFSLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML-RMGFIED 169 The following BLAST results are available for this feature:
BLAST of CB290926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290926 ID=CB290926; Name=CB290926; organism=Citrus sinensis; type=EST; length=755bpback to top |