CB290926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DEAD_ECO57 (Cold-shock DEAD box protein A OS=Escherichia coli O157:H7 GN=deaD PE=3 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21 Identity = 67/171 (39.18%), Postives = 95/171 (55.56%), Query Frame = 1 Query: 247 TTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDD 753 TTF DL L +L+ L ++ ++KPS IQA +P +L R+++ A+ GSGKT F L +L +DP LKAPQ L + PTRELA+Q E + KH + A+ V + ++ P Q+V+GTPG + + L S+L LV DEAD ML GF +D Sbjct: 6 TTFADLGLKAPILEALN-DLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML-RMGFIED 169
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 61/166 (36.75%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 253 FEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 F+D+NL ELLKG+Y F++PS IQ ++ I+ +++AQA++G+GKT F + L R+D ++KAPQAL + PTRELA+Q +V+ + H + + T++V ++ AQ+V+GTPG + + + +K+ + DEAD ML +GFR+ Sbjct: 25 FDDMNLKDELLKGVY-GYGFEEPSAIQQRAILPIVEE--HDVLAQAQSGTGKTGTFSIAALQRIDSSIKAPQALILAPTRELALQIQKVVIALAFHMDVKVHACI--GGTSFVEDTEGLK-DAQIVVGTPGRVSDNIQRHRFKTDNIKMFILDEADEML-SSGFRE 183
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 TFE + L PELLKG+Y F+ PS IQ+ ++ I++ R+ IAQA++G+GKT F +GML +D K QAL + PTRELA Q V++ +G + I + + N KR Q+V GTPG + + + L +K+L+ DEAD + + GF++ Sbjct: 27 TFESMRLKPELLKGIYA-YGFEAPSAIQSRAIMQIISG--RDTIAQAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYACI--GGKNVGTDIKRLQQGQQIVSGTPGRVLDVIKRRNLSTRHIKMLILDEADELFTK-GFKE 187
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DHH1_NEUCR (ATP-dependent RNA helicase dhh-1 OS=Neurospora crassa GN=dhh-1 PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20 Identity = 61/172 (35.47%), Postives = 93/172 (54.07%), Query Frame = 1 Query: 220 TGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDE 735 T D T +ED +LL G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L++++P + Q L + PTRELA+Q +V + +GKH GI V T T R +V+GTPG I + S + + DEAD +L + Sbjct: 36 TEDVTNTRGLDWEDFIHDRDLLMGIF-EAGFEKPSPIQEEAIPVALTG--RDILARAKNGTGKTAAFVIPALNKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSQ 202
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: DDX6_DROME (Putative ATP-dependent RNA helicase me31b OS=Drosophila melanogaster GN=me31B PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20 Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 1 Query: 127 ELDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHML 729 +L + G T D+ +K +D+ KT DT FE+ L ELL G++ E +++PS IQ ++P+ L+ ++++A+A+NG+GKT + + +L ++DP QAL + PTRELA+Q ++ ++ KH I V T T R Q++I TPG I M K S +ILV DEAD +L Sbjct: 21 DLQIAGNTSDDMGWKSKLKLPPKDNRFKTTDVTDT---RGNEFEEFCLKRELLMGIF-EKGWERPSPIQEAAIPIALSG--KDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLDI--RVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLL 213
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A1_RABIT (Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus GN=EIF4A1 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20 Identity = 64/169 (37.87%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAIS-LPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +F+D+NLS LL+G+Y F+KPS IQ + LP I ++IAQA++G+GKT F + +L +++ +LKA QAL + PTRELA Q +V+ +G + G + C TN + K +++GTPG + ++ + L +K+ V DEAD ML GF+D Sbjct: 25 SFDDMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD 186
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20 Identity = 64/169 (37.87%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAIS-LPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +F+D+NLS LL+G+Y F+KPS IQ + LP I ++IAQA++G+GKT F + +L +++ +LKA QAL + PTRELA Q +V+ +G + G + C TN + K +++GTPG + ++ + L +K+ V DEAD ML GF+D Sbjct: 33 SFDDMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD 194
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A1_MOUSE (Eukaryotic initiation factor 4A-I OS=Mus musculus GN=Eif4a1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20 Identity = 64/169 (37.87%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAIS-LPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +F+D+NLS LL+G+Y F+KPS IQ + LP I ++IAQA++G+GKT F + +L +++ +LKA QAL + PTRELA Q +V+ +G + G + C TN + K +++GTPG + ++ + L +K+ V DEAD ML GF+D Sbjct: 33 SFDDMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD 194
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A1_MACFA (Eukaryotic initiation factor 4A-I OS=Macaca fascicularis GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20 Identity = 64/169 (37.87%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAIS-LPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +F+D+NLS LL+G+Y F+KPS IQ + LP I ++IAQA++G+GKT F + +L +++ +LKA QAL + PTRELA Q +V+ +G + G + C TN + K +++GTPG + ++ + L +K+ V DEAD ML GF+D Sbjct: 33 SFDDMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD 194
BLAST of CB290926 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20 Identity = 64/169 (37.87%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 250 TFEDLNLSPELLKGLYVEMKFQKPSKIQAIS-LPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRD 750 +F+D+NLS LL+G+Y F+KPS IQ + LP I ++IAQA++G+GKT F + +L +++ +LKA QAL + PTRELA Q +V+ +G + G + C TN + K +++GTPG + ++ + L +K+ V DEAD ML GF+D Sbjct: 33 SFDDMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD 194 The following BLAST results are available for this feature:
BLAST of CB290926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290926 ID=CB290926; Name=CB290926; organism=Citrus sinensis; type=EST; length=755bpback to top |