CB290936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_ECOL6 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6 GN=betB PE=3 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 69/185 (37.30%), Postives = 101/185 (54.59%), Query Frame = -3 Query: 138 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 680 FE+K++ + + GD FDP GP V D + +I GK EGA +L + P +F + S+DM I ++EIFGPVM+++ +++ E I+ AN+T YGLAAGI+T L + V + AGI WIN + + P GGYK SG GR+ G+ +Y QVKS+ + F Sbjct: 302 FEQKVLARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGNVLKGDSFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEIPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKF 486
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 70/183 (38.25%), Postives = 99/183 (54.10%), Query Frame = -3 Query: 159 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 695 G+ + FE ++E+ K VG P + A GP Q ++ +IE GK+EGA L+ EP +F +DM I ++EIFGPVM+++ F EAI AN T YGLAAG++T L + V + AGI WIN + + P GGYK+SG GR+ GL +Y ++KSV Sbjct: 296 GVLERFEALVLERVKRIRVGAPTNAATNFGPLASAAQLQKVLGYIESGKQEGARLMAGGKRLTEGHFGNGQYVEPTVFTGCHDDMRIVREEIFGPVMSILVFDDEDEAIARANRTAYGLAAGVVTGNLARAHRVIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLEHYTRIKSV 478
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 68/180 (37.78%), Postives = 100/180 (55.56%), Query Frame = -3 Query: 159 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 686 D F ++++E+ K VG P D GP V Q D++ FI+ GK EGA LL P +F + +DM I ++EIFGPVM+++ F++ E I AN+T YGLAAG++T+ L + + AGI WIN + + P GGYK+SG GR+ G+ +Y ++KSV Sbjct: 299 DAFTQRVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_VIBPA (Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus GN=betB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 69/189 (36.51%), Postives = 102/189 (53.97%), Query Frame = -3 Query: 138 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 692 I+D+F +L + + VVGDP D + G + K+ ++ IE K GA LLT P +F + + M ++EIFGPVM+++KF E I+ AN+T YGLAAG+ T+ L + V I AGI W+N + + P GGYK+SG GR+ G+E +Y Q KSV+ + +F Sbjct: 293 IYDDFVAQLKTRTEKLVVGDPLDENTQIGALISKEHESKVLSAIESAKASGATLLTGGYKVTDNGLQNGNFVAPTVFIDCDDSMSHVQQEIFGPVMSVLKFSEEAEVIERANDTDYGLAAGVFTQNLSRAHRVIHKIQAGICWVNAWGDSPAEMPVGGYKQSGIGRENGVETLKHYTQTKSVLVQLSDF 481
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_RHIEC (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=betB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = -3 Query: 159 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI---EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 683 EF K+L + +A ++GDP D A + GP V Q +++ +IE GK EGA L+ +P +F +V++DM IA++EIFGPVM+++ F E I AN +++GL+ G+ T L + V + AG +WIN + + PFGG K+SGFGR+ L +Y ++K+V Sbjct: 299 EFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVIAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSLAALEHYSELKTV 476
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_PSEPF (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=betB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 68/178 (38.20%), Postives = 100/178 (56.18%), Query Frame = -3 Query: 159 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 680 FE K+VE+ VG+P D GP V + + +I GK EGA +L P +F + ++DM I ++EIFGPVMA++ ++T E I+ AN+T +GLAAGI+T+ L + V + AGI WIN + D P GGYK+SG GR+ G+ +N+ ++KSV Sbjct: 302 FEAKIVERVARIRVGNPEDENTNFGPLVSFPHMESVLGYIAKGKEEGARVLCGGERLTDGEFAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILSYETEEEVIRRANDTDFGLAAGIVTRDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_PECCP (Betaine aldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=betB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 67/186 (36.02%), Postives = 104/186 (55.91%), Query Frame = -3 Query: 138 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 683 +FE+K++ + + +G+P D AV GP V + + +IE GKREGA +L P +F + +DM I ++EIFGPVM+++ ++ E I+ AN+++YGLAAG++T L + V + AGI WIN + + P GGYK SG GR+ G+ +Y Q+KSV + F Sbjct: 301 QFEEKILARVQRIRIGNPTDEAVNFGPLVSFPHRESVLRYIESGKREGARVLVGGEPMTDEKYAQGAFVAPTVFTDCRDDMKIVREEIFGPVMSILTYQNEDEVIRRANDSEYGLAAGVVTGDLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGVGRENGITTLEHYTQIKSVQVELGEF 486
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 68/186 (36.56%), Postives = 103/186 (55.38%), Query Frame = -3 Query: 138 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 683 +FE+K++ + GDP D +V GP V + + +IE GKREGA +L P +F + +DM I +KEIFGPVM+++ ++ E I+ AN+++YGLAAGI+T+ L + V + AGI WIN + + P GGYK SG GR+ G+ +Y Q+KS+ + F Sbjct: 301 QFEEKILACVQRIRAGDPTDESVNFGPLVSFPHRESVLRYIESGKREGARVLVGGEPMTDGDYAQGAYVAPTVFTDCRDDMKIVRKEIFGPVMSILTYQDEDEVIRRANDSEYGLAAGIVTRDLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGVGRENGVTTLEHYTQIKSIQVELGEF 486
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = -3 Query: 159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692 I D F K++E+ K VG P D GP V Q D++ FI GK EGA LL P +F + +DM I ++EIFGPVM+++ F++ E I AN+T YGLAAG++T+ L + + AGI WIN + + P GGYK+SG GR+ G+ +Y ++KSV Sbjct: 297 IKDAFTAKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIASGKAEGAKLLAGGTRLTDGHFADGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28 Identity = 68/178 (38.20%), Postives = 100/178 (56.18%), Query Frame = -3 Query: 159 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 680 FE K++E+ K +GDP D A GP V + + +IE G+ EGA LL P +F + +DM I ++EIFGPVM+++ + + E I+ AN+T YGLAAG++T+ L + V + AGI WIN + + P GGYK+SG GR+ GL +Y ++KSV Sbjct: 302 FEAKVLERVKRIRLGDPLDDATNFGPLVSYAHMESVLGYIEKGRSEGARLLIGGTRVSDGDYAKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILIYDSEEEVIRRANDTDYGLAAGVVTRDLNRAHRVIHKLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLVTLGHYTRIKSV 479 The following BLAST results are available for this feature:
BLAST of CB290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290936 ID=CB290936; Name=CB290936; organism=Citrus sinensis; type=EST; length=697bpback to top |