CB290936

Overview
NameCB290936
Unique NameCB290936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ABDH_SALPA (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi A GN=ydcW PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 44/181 (24.31%), Postives = 84/181 (46.41%), Query Frame = -3 
Query:  156 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKR-EGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVV 695
            GI+D   +KL     +  +G P D +   GP        R+   +E  K      ++T             P +  +  ++  I ++E+FGPV+++  F    + ++  N+++YGLA+ + T+ +   + +   +  G  WIN  F    + P GG K+SG+G+D  L    +Y  V+ ++
Sbjct:  291 GIYDALVEKLGNAVSSLKMGAPEDESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDEDQVLRWGNDSRYGLASSVWTQDVGRAHRLSARLQYGCTWINTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIM 471
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACHK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACCZ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACCQ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain Q1) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACC7 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH187) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACC3 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACC1 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACC0 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH820) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACAN (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
[Close]
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACAH (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3 
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497
The following BLAST results are available for this feature:
BLAST of CB290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
ABDH_SALPA2.112e-1424.31Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ROCA_BACHK6.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCZ6.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCQ6.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC76.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC36.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC16.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC06.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAN6.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAH6.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ae03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290936 ID=CB290936; Name=CB290936; organism=Citrus sinensis; type=EST; length=697bp
AATACAAAAACCCTTGTATTTTATGAAAGCCTTTAAATGAAAATAATTTG
CAAACCCCAAACTCAAAAAGTCTTGCAATTTTAATCAGCCACCACTTATT
TTTTCAAACCGGGGGGGGGAAGGGTTCCCACCCAAGGAAAATTGAAAATG
GGAGTCACAACGGACTTGACCTGCAAATAGTTATGAAAAAATTCCAGTCC
ACAGTCTCTACCAAATCCACTCTTTTTGTATCCTCCGAAAGGGCAGTCCC
TGTCAAAAGCAAAAAAACAATTGATCCATATAATGCCTGCTCAAATTGAT
CTAAAAACGGTATTACCCACTTTCAGGGCCTTTGTCATAATGCCTGCTGC
TAGGCCATATTGGGTATTATTTGCACTCTTAATTGCCTCCCCAACAGTCT
TGAATTTCATCAAGGCCATCACAGGGCCAAAAATTTCTTTCTTTGCTATC
AGCATGTCTTCCGAAACATTTGGGAAAATTGGAGGCTCAATATAATACCC
CTTCTTGCCAATAGGCTTACCCCCTGTTAACAAGGGGGCTCCTTCCCTCT
TGCCATGCTCAATGAACAAAAAAATTCTATCAAACTGCTTCTTATCAACC
TGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCCCCAACTACCCAAGC
TTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCAAAAATTCCTT
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