CB290936

Overview
NameCB290936
Unique NameCB290936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACAC (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ROCA_BACAA (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain A0248) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = -3
Query:  198 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN--CFFAFDRDCPFGGYKKSGFGRDCG 692
            ++D    + VE  K   V +P       GP  D+  FD++  ++  GK EG  +L            I+P I  +V+ED  + K+EIFGPV+A  K K    A+  ANNT+YGL   +++               G ++ N  C  A     PFGG+  SG     G
Sbjct:  332 VYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGR-ILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: GABD2_MYCS2 (Putative succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium smegmatis GN=gabD2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 48/184 (26.09%), Postives = 87/184 (47.28%), Query Frame = -3
Query:  153 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI-EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAF---DRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVT 692
            + DEF  K  E+ ++  +   +D     G  + + Q   +   ++  K +GA ++              EP +   V+++M  A+ E FGPV+++   ++V EAI+ AN+T+YGL A +   +   G  +   + AG + ++  +A        P GG K SG GR  G +    Y + ++V T
Sbjct:  300 VADEFTAKFGEQVRSMRLAATYDFTADMGSLISEDQIKTVSGHVDDAKAKGATVIAGGNIRPDIGPRFYEPTVLTGVTDEMECARNETFGPVVSIYPVESVAEAIEKANDTEYGLNASVWAGSKTEGEAIAAQLQAGTVNVDEGYALAFGSTAAPMGGMKASGVGRRHGADGILKYTESQTVAT 483          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ALDA_ECOLI (Lactaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=aldA PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14
Identity = 51/180 (28.33%), Postives = 84/180 (46.67%), Query Frame = -3
Query:  159 GIFDEFEKKLVEKAKAWVVGDPFDPA-VRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 695
            GI+D+F  +L E  +A   G+P +   +  GP ++    +R+   +     EGA +               P +  +V ++M I  +E FGPV+ ++ F T+ +AI  AN++ YGL + I T+ L V     + +  G  +IN            G++KSG G   G    H YLQ + V
Sbjct:  296 GIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: IOLA_BACSU (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis GN=iolA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 57/170 (33.53%), Postives = 80/170 (47.06%), Query Frame = -3
Query:  210 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIE-PPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN-------CFFAFDRDCPFGGYKKSGFG 695
            GI DEF  KL EK     +G+  D  V  GP + +    R   +IE G  EGA L+               P IF NV+ +M I K EIF PV+++++ K + EAI+ AN +++   A + T           +I AG++ IN        FF      PF G+K S FG
Sbjct:  295 GIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFF------PFSGWKSSFFG 458          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: IOLA_BACNA (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis subsp. natto GN=iolA PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 57/170 (33.53%), Postives = 80/170 (47.06%), Query Frame = -3
Query:  210 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIE-PPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN-------CFFAFDRDCPFGGYKKSGFG 695
            GI DEF  KL EK     +G+  D  V  GP + +    R   +IE G  EGA L+               P IF NV+ +M I K EIF PV+++++ K + EAI+ AN +++   A + T           +I AG++ IN        FF      PF G+K S FG
Sbjct:  295 GIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFF------PFSGWKSSFFG 458          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: AL221_ARATH (Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13
Identity = 48/128 (37.50%), Postives = 69/128 (53.91%), Query Frame = -3
Query:  111 PPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFA--FDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNFPWVGT-LPPP 485
            P +  NV+ +M I K+E FGP+M +M+F T  E IK AN+++Y L   + + +      +   I  G+  IN F +    +  PFGG K SGFGR  G+E       VKSVV   F +P + T +P P
Sbjct:  417 PTVLINVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRF-WPLIKTKIPKP 543          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: GABD2_MYCUA (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 51/198 (25.76%), Postives = 92/198 (46.46%), Query Frame = -3
Query:  114 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI-EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAF---DRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTP-IFNFPWVGTLPP 692
            I DEF +K  +  ++  +G  +D +V  G  + + Q   +   ++    +GA ++              EP +  +V+ +M  A  E FGP++++     V EA++ AN+T+YGL A +   +   G  +   + +G + +N  +AF       P GG   SG GR  G E    Y + +++ T  +FN      +PP
Sbjct:  300 IADEFTRKFGDAVRSMKLGTAYDFSVDMGSLISEGQLKTVSGHVDDATAKGAKVIAGGKARPDVGPLFYEPTVLTDVTHEMECADNETFGPLVSIYPVADVEEAVEKANDTEYGLNASVWAGSTPEGEKIAARLRSGTVNVNEGYAFAWGSLSAPMGGMGISGVGRRHGPEGLLKYTESQTIATARVFNLDPPMGVPP 497          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus kaustophilus GN=iolA1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13
Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = -3
Query:  138 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIE---PPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN----CFFAFDRDCPFGGYKKSGF------GRDCGLEFFHNYLQVKSVVTPIFNF 686
            + F ++L +KA   ++G+  DP V   P + +   +++  +I+ G  EGA LL                 P IF  V+ DM IAK+EIF PV++L++   + EA+     ++YG  A I TK  K          AG++ IN       AF    PF G+K S +      G+D G+ F+      K ++T  F+F
Sbjct:  301 ETFVRRLKQKADELIIGNGMDPEVLLTPVIRQSHREKVLGYIQKGIEEGAVLLRDGRKEMDDRPEGNFLGPTIFDYVTPDMTIAKEEIFAPVLSLLRANDLDEALSYIRKSRYGNGATIYTKDAKAVRKFREEADAGMLGINVGVPATMAF---FPFSGWKDSFYGDLHVNGKD-GVNFYTR----KKMITSRFDF 488          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ALDH9_POLMI (Aldehyde dehydrogenase 9 (Fragment) OS=Polyandrocarpa misakiensis GN=ALDH9 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13
Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = -3
Query:  447 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLI 695
            G++DEF KK VE+AK   VGDPF   + QGPQ+D +QF++I   IE GK+ GA LL            IEP +F +V +D  I
Sbjct:  144 GVYDEFVKKSVERAKKRTVGDPFTEGIEQGPQIDTEQFNKINRMIEEGKQSGAKLLCGGKRWGDKGYYIEPTVFSDVPDDSTI 226          
The following BLAST results are available for this feature:
BLAST of CB290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
ROCA_BACAC6.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAA6.145e-1430.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
GABD2_MYCS26.145e-1426.09Putative succinate-semialdehyde dehydrogenase [NAD... [more]
ALDA_ECOLI8.026e-1428.33Lactaldehyde dehydrogenase OS=Escherichia coli (st... [more]
IOLA_BACSU1.048e-1333.53Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACNA1.048e-1333.53Methylmalonate semialdehyde dehydrogenase [acylati... [more]
AL221_ARATH1.369e-1337.50Aldehyde dehydrogenase 22A1 OS=Arabidopsis thalian... [more]
GABD2_MYCUA2.335e-1325.76Putative succinate-semialdehyde dehydrogenase [NAD... [more]
IOLA1_GEOKA3.050e-1330.10Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALDH9_POLMI3.050e-1345.78Aldehyde dehydrogenase 9 (Fragment) OS=Polyandroca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ae03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290936 ID=CB290936; Name=CB290936; organism=Citrus sinensis; type=EST; length=697bp
AATACAAAAACCCTTGTATTTTATGAAAGCCTTTAAATGAAAATAATTTG
CAAACCCCAAACTCAAAAAGTCTTGCAATTTTAATCAGCCACCACTTATT
TTTTCAAACCGGGGGGGGGAAGGGTTCCCACCCAAGGAAAATTGAAAATG
GGAGTCACAACGGACTTGACCTGCAAATAGTTATGAAAAAATTCCAGTCC
ACAGTCTCTACCAAATCCACTCTTTTTGTATCCTCCGAAAGGGCAGTCCC
TGTCAAAAGCAAAAAAACAATTGATCCATATAATGCCTGCTCAAATTGAT
CTAAAAACGGTATTACCCACTTTCAGGGCCTTTGTCATAATGCCTGCTGC
TAGGCCATATTGGGTATTATTTGCACTCTTAATTGCCTCCCCAACAGTCT
TGAATTTCATCAAGGCCATCACAGGGCCAAAAATTTCTTTCTTTGCTATC
AGCATGTCTTCCGAAACATTTGGGAAAATTGGAGGCTCAATATAATACCC
CTTCTTGCCAATAGGCTTACCCCCTGTTAACAAGGGGGCTCCTTCCCTCT
TGCCATGCTCAATGAACAAAAAAATTCTATCAAACTGCTTCTTATCAACC
TGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCCCCAACTACCCAAGC
TTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCAAAAATTCCTT
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