CB290936

Overview
NameCB290936
Unique NameCB290936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: IOLA2_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Geobacillus kaustophilus GN=iolA2 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = -3
Query:  210 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIE---PPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN-------CFFAFDRDCPFGGYKKSGFG 692
            I DE  +KLV  A    +G+  + +V  GP + +    R   +IE G++EGA L+                 P IF  V+ DM I K EIF PV+++++ +T+ EAI+ AN + +   A I T+           I AG++ +N        FF      PF G+K S +G
Sbjct:  297 IADELVEKLVAAANELKIGNGLEESVFLGPVIREAHKQRTVKYIELGEKEGAILVRDGRKDAAVQDNGYFIGPTIFDRVTTDMTIWKDEIFAPVLSIVRVETLDEAIEVANKSPFANGACIYTRDGGNVRKFREEIDAGMLGVNLGVPAPMAFF------PFSGWKNSFYG 461          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 54/166 (32.53%), Postives = 78/166 (46.99%), Query Frame = -3
Query:  210 IFDEFEKKLVEKAKAWV----VGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRD-CPFGGYKKSGFG 692
            + D    KLVEK  A V    VG P D A    P +D K  D +   I+  + +GA  +              P +F NV+ DM +A +E FGPV+  ++  +V EAI+ +N ++YGL A + T    +   +   +  G + IN       D  PF G KKSG G
Sbjct:  292 VMDSIADKLVEKVSALVNNLTVGMPEDNADIT-PLIDTKAADYVEGLIKDAQEKGAKEVISFKREGNLI---SPVLFDNVTTDMRLAWEEPFGPVLPFIRVNSVEEAIEISNKSEYGLQASVFTNNFPLAFKIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: GABD_SYNY3 (Probable succinate-semialdehyde dehydrogenase [NADP+] OS=Synechocystis sp. (strain PCC 6803) GN=gabD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 50/178 (28.09%), Postives = 74/178 (41.57%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            + +EF ++L +  +A  VGDP       GP         I   +E     GA                 P +  +V  +    ++E FGPV        + EAI  AN+  +GL A   T   +    + R I AG ++IN     D   PFGG K+SGFGR+ G      ++  K+V
Sbjct:  274 VAEEFFQRLTKAFQALKVGDPSLSTTDIGPLATPDILADIVAQVEQTIAAGAHCRCGGQALDQPGNYYPPTLLTDVPPNAPTYRQEFFGPVALGFTVDNLEEAIALANDIPFGLGASAWTTNPENQQKLIRGIEAGAVFINGMTKSDPRIPFGGIKRSGFGRELGRMGILEFVNAKTV 451          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: AL7A1_HUMAN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 54/181 (29.83%), Postives = 83/181 (45.86%), Query Frame = -3
Query:  171 IFDEFEKKLVEKAKAWV-VGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI-----*AGIIWINC-FFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQ 692
            I DE   +L +KA A + VG+P+DP V  GP   K+        +E  K+EG  ++            +EP I   +  D  IA  E F P++ + KFK   E     N  + GL++ I TK L     +FR +       GI+ +N      +    FGG K +G GR+ G + +  Y++
Sbjct:  314 IHDEVVNRL-KKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLSSSIFTKDL---GRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR 490          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: IOLA2_BACAH (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus thuringiensis (strain Al Hakam) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 49/171 (28.65%), Postives = 85/171 (49.71%), Query Frame = -3
Query:  210 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIE---PPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWIN-------CFFAFDRDCPFGGYKKSGFG 692
            I D+  ++LVE+A   V+G+  D  V  GP +     +R   +I+ G  +GA L+                 P IF +V+++M I + EIF PV+++++ K++ EAI+ AN +++   A I T +         +I +G++ +N        FF      PF G+K S +G
Sbjct:  298 IADQLVERLVEEANKIVIGNGLDEDVFLGPVIRDNHKERTIGYIDSGVEQGATLVRDGREDTAVKGAGYFVGPTIFDHVTKEMKIWQDEIFAPVLSIVRVKSLDEAIEIANESRFANGACIYTDSGASVRQFRETIESGMLGVNVGVPAPMAFF------PFSGWKDSFYG 462          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: AL7B4_ARATH (Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 52/183 (28.42%), Postives = 89/183 (48.63%), Query Frame = -3
Query:  171 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGP---QVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI-----*AGIIWINC-FFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQ 692
            ++D+  ++L+   K   +G+P +     GP      KK F++    IE  K +G  +LT           +EP I   +S D  + K+E+F PV+ ++KFK+ GEA+   N+   GL++ I T+       +FR I       GI+ +N      +    FGG K +G GR+ G + +  Y++
Sbjct:  312 VYDKVLEQLLTSYKQVKIGNPLEKGTLLGPLHTPESKKNFEK---GIEVIKSQGGKILTGGKAVEGEGNFVEPTII-EISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSVPQGLSSSIFTRN---PENIFRWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: AL7A1_BRANA (Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 52/183 (28.42%), Postives = 89/183 (48.63%), Query Frame = -3
Query:  171 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGP---QVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI-----*AGIIWINC-FFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQ 692
            ++D+  ++L+   K   +GDP +     GP      KK F++    IE  K +G  +LT           +EP I   +S D  + K+E+F PV+  +KFKT  EA+   N+   GL++ I T++    + +F+ I       GI+ +N      +    FGG K +G GR+ G + +  Y++
Sbjct:  315 VYDKVLEQLLTSYKQVKIGDPLEKGTLLGPLHTPESKKNFEK---GIEVIKSQGGKVLTGGKAVEGEGNFVEPTII-EISSDAAVVKEELFAPVLYALKFKTFEEAVAINNSVPQGLSSSIFTRS---PDNIFKWIGPMGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 490          
The following BLAST results are available for this feature:
BLAST of CB290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
IOLA2_GEOKA2.855e-1130.99Methylmalonate semialdehyde dehydrogenase [acylati... [more]
GAPN_STREI4.869e-1132.53NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GABD_SYNY36.359e-1128.09Probable succinate-semialdehyde dehydrogenase [NAD... [more]
AL7A1_HUMAN6.359e-1129.83Alpha-aminoadipic semialdehyde dehydrogenase OS=Ho... [more]
IOLA2_BACAH8.306e-1128.65Methylmalonate semialdehyde dehydrogenase [acylati... [more]
AL7B4_ARATH8.306e-1128.42Aldehyde dehydrogenase family 7 member B4 OS=Arabi... [more]
AL7A1_BRANA8.306e-1128.42Aldehyde dehydrogenase family 7 member A1 OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ae03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290936 ID=CB290936; Name=CB290936; organism=Citrus sinensis; type=EST; length=697bp
AATACAAAAACCCTTGTATTTTATGAAAGCCTTTAAATGAAAATAATTTG
CAAACCCCAAACTCAAAAAGTCTTGCAATTTTAATCAGCCACCACTTATT
TTTTCAAACCGGGGGGGGGAAGGGTTCCCACCCAAGGAAAATTGAAAATG
GGAGTCACAACGGACTTGACCTGCAAATAGTTATGAAAAAATTCCAGTCC
ACAGTCTCTACCAAATCCACTCTTTTTGTATCCTCCGAAAGGGCAGTCCC
TGTCAAAAGCAAAAAAACAATTGATCCATATAATGCCTGCTCAAATTGAT
CTAAAAACGGTATTACCCACTTTCAGGGCCTTTGTCATAATGCCTGCTGC
TAGGCCATATTGGGTATTATTTGCACTCTTAATTGCCTCCCCAACAGTCT
TGAATTTCATCAAGGCCATCACAGGGCCAAAAATTTCTTTCTTTGCTATC
AGCATGTCTTCCGAAACATTTGGGAAAATTGGAGGCTCAATATAATACCC
CTTCTTGCCAATAGGCTTACCCCCTGTTAACAAGGGGGCTCCTTCCCTCT
TGCCATGCTCAATGAACAAAAAAATTCTATCAAACTGCTTCTTATCAACC
TGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCCCCAACTACCCAAGC
TTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCAAAAATTCCTT
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