CB290936

Overview
NameCB290936
Unique NameCB290936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 7.720e-33
Identity = 72/178 (40.45%), Postives = 105/178 (58.99%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            +++E  +KL +  ++  VGDPFD  V QG Q   KQ  +I  +++  K EGA L+T           ++P +F +V  DM I K+E+FGP++ + KF TV E I  AN++QYGLAAGI T  +     V + + AG +WIN +  F ++ PFGG+ +SG GR+ G     NY Q KSV
Sbjct:  334 VYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKGDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTYNNFHQNVPFGGFGQSGIGREMGEAALSNYTQTKSV 511          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.008e-32
Identity = 72/180 (40.00%), Postives = 107/180 (59.44%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFK--TVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I DEF K++V + K   +GDP D +   GPQ  K   D++  + + G +EGA L+             EP IF +V+++M IAK+E FGP+M + KFK   V E +K ANNT++GLA+G+ TK +     V   + AG +++N +   D   PFGG+K+SGFG+D G E  + YL+ K+V
Sbjct:  719 IHDEFVKRVVGEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGAKLVYGGKQVERPGFFFEPTIFTDVTDEMFIAKEESFGPIMIISKFKDGDVDEVLKRANNTEFGLASGVFTKDISKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKAV 898          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.720e-32
Identity = 69/177 (38.98%), Postives = 106/177 (59.89%), Query Frame = -3
Query:  159 FDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 689
            +DE   ++   A++   G       + GP V K+Q +R+  +I+ GK EGA  +T           + P +F NV ++M IAK+EIFGPV+  + ++TV E I+ AN+++YGLAAG+ T+ +K  + +   + AG +W+NC+  FD   PFGGYK+SG GR+ G     NY +VKSV
Sbjct:  313 YDEVVDEMASYAESLRQGAGLHKDTQIGPLVSKEQHERVLSYIQKGKDEGAKAVTGGSCPFEAGYFVAPTVFANVEDEMTIAKEEIFGPVLTAIPYETVDEVIERANHSEYGLAAGLWTENVKQAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYALDNYTEVKSV 489          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.456e-31
Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I + F ++LVE+ +   +GDPFD A + GP +   Q D++  +I+ GK EGA L                 IEP +F +V++ M IA++EIFGPVM++++F    E I  AN++++GLAAG+ T  L  G+ V   I AG  WIN +     + PFGGYK+SG GR+ G+    +Y Q+K+V
Sbjct:  295 IRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTSVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 71/185 (38.38%), Postives = 109/185 (58.92%), Query Frame = -3
Query:  138 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 680
            FE+K+VE+ K   +GDP D  V  GP V  +  D +  +I+ GKREGA LL    +           + P +F +  +DM I ++EIFGPVM+++ +++  E I+ AN+T+YGLAAG++T+ L   + V   + AGI WIN +     + P GGYK SG GR+ G+    +Y Q+KS+   + +F
Sbjct:  302 FEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGCSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVELGSF 486          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BRUSU (Betaine aldehyde dehydrogenase OS=Brucella suis GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I + F ++LVE+ +   +GDPFD A + GP +   Q D++  +I+ GK EGA L                 IEP +F +V++ M IA++EIFGPVM++++F    E I  AN++++GLAAG+ T  L  G+ V   I AG  WIN +     + PFGGYK+SG GR+ G+    +Y Q+K+V
Sbjct:  295 IRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BRUSI (Betaine aldehyde dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I + F ++LVE+ +   +GDPFD A + GP +   Q D++  +I+ GK EGA L                 IEP +F +V++ M IA++EIFGPVM++++F    E I  AN++++GLAAG+ T  L  G+ V   I AG  WIN +     + PFGGYK+SG GR+ G+    +Y Q+K+V
Sbjct:  295 IRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BRUO2 (Betaine aldehyde dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I + F ++LVE+ +   +GDPFD A + GP +   Q D++  +I+ GK EGA L                 IEP +F +V++ M IA++EIFGPVM++++F    E I  AN++++GLAAG+ T  L  G+ V   I AG  WIN +     + PFGGYK+SG GR+ G+    +Y Q+K+V
Sbjct:  295 IRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BRUME (Betaine aldehyde dehydrogenase OS=Brucella melitensis GN=betB PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I + F ++LVE+ +   +GDPFD A + GP +   Q D++  +I+ GK EGA L                 IEP +F +V++ M IA++EIFGPVM++++F    E I  AN++++GLAAG+ T  L  G+ V   I AG  WIN +     + PFGGYK+SG GR+ G+    +Y Q+K+V
Sbjct:  295 IRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BRUC2 (Betaine aldehyde dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I + F ++LVE+ +   +GDPFD A + GP +   Q D++  +I+ GK EGA L                 IEP +F +V++ M IA++EIFGPVM++++F    E I  AN++++GLAAG+ T  L  G+ V   I AG  WIN +     + PFGGYK+SG GR+ G+    +Y Q+K+V
Sbjct:  295 IRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
The following BLAST results are available for this feature:
BLAST of CB290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
ALDH5_YEAST7.720e-3340.45Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
FTHFD_XENTR1.008e-3240.0010-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
ALDH4_BACSU1.720e-3238.98Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
BETB_BRUMB1.456e-3139.56Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_YERPY1.901e-3138.38Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_BRUSU1.901e-3139.56Betaine aldehyde dehydrogenase OS=Brucella suis GN... [more]
BETB_BRUSI1.901e-3139.56Betaine aldehyde dehydrogenase OS=Brucella suis (s... [more]
BETB_BRUO21.901e-3139.56Betaine aldehyde dehydrogenase OS=Brucella ovis (s... [more]
BETB_BRUME1.901e-3139.56Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUC21.901e-3139.56Betaine aldehyde dehydrogenase OS=Brucella canis (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ae03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290936 ID=CB290936; Name=CB290936; organism=Citrus sinensis; type=EST; length=697bp
AATACAAAAACCCTTGTATTTTATGAAAGCCTTTAAATGAAAATAATTTG
CAAACCCCAAACTCAAAAAGTCTTGCAATTTTAATCAGCCACCACTTATT
TTTTCAAACCGGGGGGGGGAAGGGTTCCCACCCAAGGAAAATTGAAAATG
GGAGTCACAACGGACTTGACCTGCAAATAGTTATGAAAAAATTCCAGTCC
ACAGTCTCTACCAAATCCACTCTTTTTGTATCCTCCGAAAGGGCAGTCCC
TGTCAAAAGCAAAAAAACAATTGATCCATATAATGCCTGCTCAAATTGAT
CTAAAAACGGTATTACCCACTTTCAGGGCCTTTGTCATAATGCCTGCTGC
TAGGCCATATTGGGTATTATTTGCACTCTTAATTGCCTCCCCAACAGTCT
TGAATTTCATCAAGGCCATCACAGGGCCAAAAATTTCTTTCTTTGCTATC
AGCATGTCTTCCGAAACATTTGGGAAAATTGGAGGCTCAATATAATACCC
CTTCTTGCCAATAGGCTTACCCCCTGTTAACAAGGGGGCTCCTTCCCTCT
TGCCATGCTCAATGAACAAAAAAATTCTATCAAACTGCTTCTTATCAACC
TGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCCCCAACTACCCAAGC
TTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCAAAAATTCCTT
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