CB290936

Overview
NameCB290936
Unique NameCB290936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.532e-31
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = -3
Query:  138 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 680
            FE+K+VE+ K   +GDP D     GP V  +  D +  +I+ GKREGA LL    +           + P +F +  +DM I ++EIFGPVM+++ +++  E I+ AN+T+YGLAAG++T+ L   + V   + AGI WIN +     + P GGYK SG GR+ G+    +Y Q+KS+   + +F
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVELGSF 486          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.532e-31
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = -3
Query:  138 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 680
            FE+K+VE+ K   +GDP D     GP V  +  D +  +I+ GKREGA LL    +           + P +F +  +DM I ++EIFGPVM+++ +++  E I+ AN+T+YGLAAG++T+ L   + V   + AGI WIN +     + P GGYK SG GR+ G+    +Y Q+KS+   + +F
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVELGSF 486          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.532e-31
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = -3
Query:  138 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 680
            FE+K+VE+ K   +GDP D     GP V  +  D +  +I+ GKREGA LL    +           + P +F +  +DM I ++EIFGPVM+++ +++  E I+ AN+T+YGLAAG++T+ L   + V   + AGI WIN +     + P GGYK SG GR+ G+    +Y Q+KS+   + +F
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVELGSF 486          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.532e-31
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = -3
Query:  138 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNF 680
            FE+K+VE+ K   +GDP D     GP V  +  D +  +I+ GKREGA LL    +           + P +F +  +DM I ++EIFGPVM+++ +++  E I+ AN+T+YGLAAG++T+ L   + V   + AGI WIN +     + P GGYK SG GR+ G+    +Y Q+KS+   + +F
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEDALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVELGSF 486          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_RHOS5 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=betB PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.226e-31
Identity = 70/179 (39.11%), Postives = 102/179 (56.98%), Query Frame = -3
Query:  159 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 695
            GI + F  +L E+A A  +GDP DP V+ GP V   Q +++  +IE  + EG  L+            ++P +F +V++ M +A++E+FGPVMA++ F+T  E I  AN T +GLAAG+ T  L   + V   + AG  WIN +     + PFGG K SG GR+ G     +Y QVKSV
Sbjct:  294 GIKEAFLARLAERADAIQMGDPLDPEVQMGPLVSPAQLEKVLSYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDGMTLAREEVFGPVMAVLDFETEEEVIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKMSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_RHISN (Betaine aldehyde dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betB PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.226e-31
Identity = 70/181 (38.67%), Postives = 107/181 (59.12%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI---EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I D F  +L E+ +A V+GDP D A + GP V K Q D++  +IE GK EGA L+T               +P +F +V+++M IA++EIFGPVM ++ F    E +  AN T++GL+AG+ T  L   + V   + AG +WIN +     + PFGG K+SGFGR+  +   ++Y ++K+V
Sbjct:  296 IKDAFLARLKERTEAIVIGDPMDEATQLGPMVSKAQRDKVLSYIEQGKAEGARLVTGGGIPNAVNTEGTYIQPTVFADVTDEMTIAREEIFGPVMCVLDFDDEAEVVARANATEFGLSAGVFTADLTRAHRVVDQLEAGTLWINTYNLAPVEIPFGGSKQSGFGRENSVAALNHYTELKTV 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_RHOSK (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=betB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.437e-31
Identity = 71/179 (39.66%), Postives = 103/179 (57.54%), Query Frame = -3
Query:  159 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 695
            GI + F  +L E+A A  +GDP DP V+ GP V + Q +++  +IE  + EG  L+            ++P +F +V++ M +A +E+FGPVMA++ F+T  EAI  AN T +GLAAG+ T  L   + V   + AG  WIN +     + PFGG K SG GR+ G     +Y QVKSV
Sbjct:  294 GIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLACEEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.233e-30
Identity = 68/180 (37.78%), Postives = 105/180 (58.33%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFK--TVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I DEF K++VE+ K   +GDP D +   GPQ  K   D++  + + G +EG  L+             EP IF +V+++M IAK+E FGPVM + KF    +   +K AN++++GLA+G+ TK +     V   + AG +++N +   D   PFGG+K+SGFG+D G E  + YL+ K+V
Sbjct:  719 IHDEFVKRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGGKLVYGGKQVERPGFFFEPTIFTDVTDEMFIAKEESFGPVMIISKFNDGDIDGVLKRANDSEFGLASGVFTKDINKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKAV 898          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.102e-30
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = -3
Query:  159 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLL----TXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 695
            GI D F ++LVE+ K   +G+P DP  + GP V K Q +++  +I  GK++GA L                 +EP +F  V++ M IA++EIFGPVM+++KF    E I  AN+T++GLAAG+ T+ L   + V   + AG  WIN +     + PFGG+K+SG GR+  L     Y Q+KS+
Sbjct:  294 GIHDRFVERLVERTKKIRIGNPLDPETQMGPLVSKAQHEKVVGYIGIGKQDGAVLACGGNVPSLQGFDGGFFVEPTVFTGVTDTMRIAREEIFGPVMSVLKFDGEDEVIDRANDTEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSI 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30
Identity = 69/180 (38.33%), Postives = 104/180 (57.78%), Query Frame = -3
Query:  159 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 686
            + FE KLVE+      GDP DP+V  GP V  +  +++  +I  GK +GA +L                  P +F + +++M + K+EIFGPVM+++ F    E I+ ANNT+YGLAAG+ +++L   + V   + AGI WIN +     + P GGYK+SG GR+ G+E  ++Y Q KSV
Sbjct:  299 EAFEAKLVERVARIKAGDPMDPSVNFGPLVSFEHQEKVLSYIALGKEQGARVLAGGDAWNSGEWAKGAWAAPTVFTDCTDEMRVVKEEIFGPVMSVLAFDDEEEVIRRANNTKYGLAAGVFSESLNRAHRVIHQLEAGICWINTWGESPSEMPVGGYKESGIGRENGVETLNHYTQTKSV 478          
The following BLAST results are available for this feature:
BLAST of CB290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
BETB_YERPN5.532e-3137.84Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPE5.532e-3137.84Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPA5.532e-3137.84Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERP35.532e-3137.84Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_RHOS57.226e-3139.11Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_RHISN7.226e-3138.67Betaine aldehyde dehydrogenase OS=Rhizobium sp. (s... [more]
BETB_RHOSK9.437e-3139.66Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
FTHFD_XENLA1.233e-3037.7810-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
BETB_RHILO2.102e-3038.80Betaine aldehyde dehydrogenase OS=Rhizobium loti G... [more]
BETB_CHRSD2.746e-3038.33Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ae03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290936 ID=CB290936; Name=CB290936; organism=Citrus sinensis; type=EST; length=697bp
AATACAAAAACCCTTGTATTTTATGAAAGCCTTTAAATGAAAATAATTTG
CAAACCCCAAACTCAAAAAGTCTTGCAATTTTAATCAGCCACCACTTATT
TTTTCAAACCGGGGGGGGGAAGGGTTCCCACCCAAGGAAAATTGAAAATG
GGAGTCACAACGGACTTGACCTGCAAATAGTTATGAAAAAATTCCAGTCC
ACAGTCTCTACCAAATCCACTCTTTTTGTATCCTCCGAAAGGGCAGTCCC
TGTCAAAAGCAAAAAAACAATTGATCCATATAATGCCTGCTCAAATTGAT
CTAAAAACGGTATTACCCACTTTCAGGGCCTTTGTCATAATGCCTGCTGC
TAGGCCATATTGGGTATTATTTGCACTCTTAATTGCCTCCCCAACAGTCT
TGAATTTCATCAAGGCCATCACAGGGCCAAAAATTTCTTTCTTTGCTATC
AGCATGTCTTCCGAAACATTTGGGAAAATTGGAGGCTCAATATAATACCC
CTTCTTGCCAATAGGCTTACCCCCTGTTAACAAGGGGGCTCCTTCCCTCT
TGCCATGCTCAATGAACAAAAAAATTCTATCAAACTGCTTCTTATCAACC
TGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCCCCAACTACCCAAGC
TTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCAAAAATTCCTT
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