CB290936

Overview
NameCB290936
Unique NameCB290936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURPP (Betaine aldehyde dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=betB PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30
Identity = 72/183 (39.34%), Postives = 103/183 (56.28%), Query Frame = -3
Query:  159 GIFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 695
            G+ D FE  ++E+ K   VG P D A   GP V   Q  ++  +IE GK+EGA L+                 EP +F +  +DM I ++EIFGPVM+++ F    EAI  AN+T YGLAAG++T+ L   + V   + AGI WIN +     + P GGYK+SG GR+ G+    +Y ++KSV
Sbjct:  296 GVLDRFEALVLERVKRIRVGKPTDAATNFGPLVSAAQLHKVLGYIESGKQEGARLVAGGKRLTEGHFAGGQYVEPTVFADCRDDMRIVREEIFGPVMSILVFDDEDEAIARANHTAYGLAAGVVTENLARAHRVIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 68/180 (37.78%), Postives = 103/180 (57.22%), Query Frame = -3
Query:  156 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPL-LTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVV 692
            I++EF K+ VE+A    +GDP++     GPQ+D++Q+ ++  +I+  + +GA L              IEP +F  VS++M IAK+EIFGPV  LMKF+ + + I   NN+ YG+AA I T  +    T   ++  G IW+N F  +    PFGG+K SG  R+ G      Y +VKSV+
Sbjct:  309 IYEEFVKRSVEQATRRKIGDPYELDTEHGPQIDEEQYTKVLDYIKSAQEQGAKLKYGGNKHGDKGGYYIEPTVFSEVSDNMKIAKEEIFGPVQLLMKFRDLDDVIDRCNNSDYGMAAAIFTNDINRIMTFTNAVNTGTIWVNTFHHWFPQAPFGGFKTSGISREMGKYALREYTEVKSVI 488          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_SINMW (Betaine aldehyde dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=betB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 70/181 (38.67%), Postives = 104/181 (57.46%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI---EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I   F  +L E+  A V+GDP D A + GP V   Q D++F +IE GK EGA L+T               +P +F +V+++M IA++EIFGPVM ++ F    E +  AN T++GL+AG+ T  L   + V   + AG +WIN +     + PFGG K+SGFGR+   E   +Y ++K+V
Sbjct:  296 IKQSFLARLKERTDAIVIGDPMDEATQLGPMVSTAQRDKVFSYIEKGKSEGARLVTGGGIPNNVSAEGTYIQPTVFADVTDEMTIAREEIFGPVMCVLDFDDEAEVVARANATEFGLSAGVFTADLTRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAEALKHYTELKTV 476          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = -3
Query:  132 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI--EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSVVTPIFNFPW 683
            EF  ++V+  K   + DPF+   R GP + K Q+D+I  FI   K EGA +L               EP I  +++  M I K+E+FGPV+ +  FKT  EAI+ AN+T+YGLA  + +K L+    V +++  G +W+NC        P+GG K+SGFGR+ G     NYL +K V + I + PW
Sbjct:  311 EFVDRMVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYYIEPTIITDITTSMQIWKEEVFGPVICVKTFKTEDEAIELANDTEYGLAGAVFSKDLERCERVTKALEVGAVWVNCSQPCFVHAPWGGVKRSGFGRELGEWGIENYLNIKQVTSDISDEPW 496          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 71/182 (39.01%), Postives = 102/182 (56.04%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I D F +K++E+ K   VG P D     GP V   Q D++  FIE GK EGA LL                  P +F +  +DM I ++EIFGPVM++++F++  E I  AN+T YGLAAG++T+ L   +     + AGI WIN +     + P GGYK+SG GR+ G+    +Y ++KSV
Sbjct:  297 IKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTEGHFANGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 71/182 (39.01%), Postives = 102/182 (56.04%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I D F +K++E+ K   VG P D     GP V   Q D++  FIE GK EGA LL                  P +F +  +DM I ++EIFGPVM++++F++  E I  AN+T YGLAAG++T+ L   +     + AGI WIN +     + P GGYK+SG GR+ G+    +Y ++KSV
Sbjct:  297 IKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 71/182 (39.01%), Postives = 102/182 (56.04%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I D F +K++E+ K   VG P D     GP V   Q D++  FIE GK EGA LL                  P +F +  +DM I ++EIFGPVM++++F++  E I  AN+T YGLAAG++T+ L   +     + AGI WIN +     + P GGYK+SG GR+ G+    +Y ++KSV
Sbjct:  297 IKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 71/182 (39.01%), Postives = 102/182 (56.04%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I D F +K++E+ K   VG P D     GP V   Q D++  FIE GK EGA LL                  P +F +  +DM I ++EIFGPVM++++F++  E I  AN+T YGLAAG++T+ L   +     + AGI WIN +     + P GGYK+SG GR+ G+    +Y ++KSV
Sbjct:  297 IKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 66/180 (36.67%), Postives = 104/180 (57.78%), Query Frame = -3
Query:  159 IFDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXIEPPIFPNVSEDMLIAKKEIFGPVMALMKFKT--VGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 692
            I DEF  ++VE+ K   +GDP D +   GPQ  +   +++  + E G +EGA L+            +EP +F  V + M +AK+E FGP+M + KF+   +   ++ ANNT+YGLA+G+ T+ +     V   + AG ++IN +   D   PFGG K+SGFG+D G E  + YL++K+V
Sbjct:  740 IHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGGRQVQRPGFFMEPTVFTGVEDHMYLAKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFTRDINKAMYVSDKLEAGTVFINTYNKTDVAAPFGGMKQSGFGKDLGEEALNEYLKIKTV 919          
BLAST of CB290936 vs. ExPASy Swiss-Prot
Match: BETB_BURP8 (Betaine aldehyde dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=betB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 68/178 (38.20%), Postives = 101/178 (56.74%), Query Frame = -3
Query:  159 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIFLFIEHGKREGAPLLTXXXXXXXXXXXI----EPPIFPNVSEDMLIAKKEIFGPVMALMKFKTVGEAIKSANNTQYGLAAGIMTKALKVGNTVFRSI*AGIIWINCFFAFDRDCPFGGYKKSGFGRDCGLEFFHNYLQVKSV 680
            FE +++E+ K   VG P DP+   GP     Q D++  FIE GKREGA L+                 +P +F +  +DM I ++EIFGPVM+++ F    + I+ AN+T YGLAAG++T+ L   +     + AGI WIN +     + P GGYK+SG GR+ G+    +Y ++KSV
Sbjct:  301 FEARVIERVKRIRVGKPSDPSTNFGPLASAAQLDKVLGFIESGKREGARLVAGGARIVEGDYARGQYVQPTVFSDCRDDMKIVREEIFGPVMSILSFVDEDDVIERANDTIYGLAAGVVTENLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
The following BLAST results are available for this feature:
BLAST of CB290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
BETB_BURPP2.746e-3039.34Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
CROM_ENTDO4.684e-3037.78Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]
BETB_SINMW4.684e-3038.67Betaine aldehyde dehydrogenase OS=Sinorhizobium me... [more]
BADH_ATRHO4.684e-3037.63Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
BETB_BURM11.363e-2939.01Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]
BETB_BURCH1.363e-2939.01Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCC1.363e-2939.01Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA1.363e-2939.01Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
AL1L2_MOUSE1.363e-2936.67Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
BETB_BURP81.780e-2938.20Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ae03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290936 ID=CB290936; Name=CB290936; organism=Citrus sinensis; type=EST; length=697bp
AATACAAAAACCCTTGTATTTTATGAAAGCCTTTAAATGAAAATAATTTG
CAAACCCCAAACTCAAAAAGTCTTGCAATTTTAATCAGCCACCACTTATT
TTTTCAAACCGGGGGGGGGAAGGGTTCCCACCCAAGGAAAATTGAAAATG
GGAGTCACAACGGACTTGACCTGCAAATAGTTATGAAAAAATTCCAGTCC
ACAGTCTCTACCAAATCCACTCTTTTTGTATCCTCCGAAAGGGCAGTCCC
TGTCAAAAGCAAAAAAACAATTGATCCATATAATGCCTGCTCAAATTGAT
CTAAAAACGGTATTACCCACTTTCAGGGCCTTTGTCATAATGCCTGCTGC
TAGGCCATATTGGGTATTATTTGCACTCTTAATTGCCTCCCCAACAGTCT
TGAATTTCATCAAGGCCATCACAGGGCCAAAAATTTCTTTCTTTGCTATC
AGCATGTCTTCCGAAACATTTGGGAAAATTGGAGGCTCAATATAATACCC
CTTCTTGCCAATAGGCTTACCCCCTGTTAACAAGGGGGCTCCTTCCCTCT
TGCCATGCTCAATGAACAAAAAAATTCTATCAAACTGCTTCTTATCAACC
TGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCCCCAACTACCCAAGC
TTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCAAAAATTCCTT
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