CB290946 | Citrus Genome Database

Overview


Name	CB290946
Unique Name	CB290946
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	711

Libraries


Library Name	Type
Washington Navel orange cold acclimated flavedo & albedo cDNA library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.915e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.915e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.591 bits (366), Expect = 2.502e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 77.411 bits (189), Expect = 8.366e-14
Identity = 37/40 (92.50%), Postives = 40/40 (100.00%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 3.267e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 82.8037 bits (203), Expect = 1.991e-15
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 4 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.267e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 4.267e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.573e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQ 40

[Close]

BLAST of CB290946 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  135 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 362
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 1.621e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  363 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 590
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 3

Query:    6 EGIPPDQHLLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 134
            EGIPPDQ  LIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   34 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 3

Query:  591 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 710
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQ
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQ 40

The following BLAST results are available for this feature:

BLAST of CB290946 vs. ExPASy Swiss-Prot

BLAST of CB290946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_CAMDR	1.915e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	1.915e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	2.502e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	3.267e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	4.267e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	5.573e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	5.573e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	5.573e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	5.573e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	1.621e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	UCRCS01_02ae09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae09, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB290946 ID=CB290946; Name=CB290946; organism=Citrus sinensis; type=EST; length=711bp
ACTGGGAGGGGATCCCTCCGGATCAGCACCTGCTGATCTTCGCCGGAAAG
CAACTCGAAGATGGCCGCACCTTGGCCGATTACAACATCCAGAAGGAGTC
AACGCTCCACCTCGTGCTCAGGCTCCGTGGTGGCATGCAGATCTTCGTCA
AAACCCTAACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCCGACACG
ATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGA
CCAGCAGAGGCTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCT
TGGCCGATTACAACATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGG
CTCCGTGGTGGCATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGAT
CACTCTCGAGGTGGAGAGTTCCGATACGATTGATAATGTCAAGGCCAAGA
TCCAAGACAAGGAAGGGATCCCACCAGATCAACAAAGATTGATCTTTGCC
GGGAAACAATTAGAAGACGGCCGCACGTTGGCTGACTATAACATCCAGAA
AGAGTCAACTCTTCACCTTGTCCTCCGTCTCCGTGGAGGCATGCAAATTT
TTGTCAAGACTTTGACTGGGAAGACTATTACTCTGGAGGTGGAGAGTTCT
GATACAATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAAGGGATTCC
ACCAGATCAGC