CB290955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.708e-28 Identity = 59/139 (42.45%), Postives = 91/139 (65.47%), Query Frame = -3 Query: 107 DNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGM-ISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKS--TTLYGSSPIFFLTPSGTLRPINIELTPPP 514 + + ++ P + D+F W RD EF RQ L G+NP +I L+ E P++S LD +YGP ES +T E+I +E+ ++E+A+++K+LF +DYHD+ LP+VEK+ +K Y S IFF + +G LRP+ IEL+ PP Sbjct: 395 ETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTTIEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSLPP 533
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.207e-27 Identity = 72/202 (35.64%), Postives = 105/202 (51.98%), Query Frame = -3 Query: 50 LGFPYLCGIDALFNEGVNFPPLKQ*GFWNTL--LPRLVKAIEDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNGKPQW--KQVFLPSWHSTE 643 L F + L+ GV P F + + +P + + G+ + PP M DK W DEEF R+T+ GLNP I++I E PL S LD + YG I E + +GG ++VE+AI+ KKLF LD+HD +PY+ K+ +T Y + IFFL GTL P+ IEL+ P G+ +V++P+ E Sbjct: 294 LEFDNFAEVHKLYEGGVTLPT----NFLSKIAPIPVIKEIFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIIAKEHLEPNLGG-LTVEQAIQNKKLFILDHHDYLIPYLRKI-NANTTKTYATRTIFFLKDDGTLTPLAIELSKPHPQGEEYGPVSEVYVPASEGVE 489
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.176e-27 Identity = 62/151 (41.06%), Postives = 87/151 (57.62%), Query Frame = -3 Query: 98 LPRLVKAIEDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNG 550 LP L + G+N+ F PP K W DEEF R+ + G+NP IR + E P KSTLD +YG S IT E + +GG ++VEEA+ ++LF LDY D F+PY+ ++ L + Y + I FL GTL+P+ IEL+ P +G Sbjct: 334 LPALKEIFRTDGENVLQFPPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDG 483
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.088e-26 Identity = 62/162 (38.27%), Postives = 93/162 (57.41%), Query Frame = -3 Query: 65 LPRLVKAIEDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNGKPQWKQVFLPS 550 +P L + + G+ + F PP + K W DEEF R+ L G+NP I+ + E P KS LD+ +YG S +T E + +GG+ +VEEA+ +LF LD+HD F+PY+E++ L + Y + I FL TL+P+ IEL+ P GK +V LP+ Sbjct: 333 IPVLKEILRTDGEQVLKFPPPHVIRVTKSAWMTDEEFGREMLAGVNPCLIQRLQEFPPKSKLDVTVYGDQTSTMTKEHLEINLGGL-TVEEALHGNRLFILDHHDAFIPYLERINDLPTAKCYATRTILFLKDDNTLKPLAIELSLPNPGGKGANSRVILPA 493
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.015e-25 Identity = 71/202 (35.15%), Postives = 106/202 (52.48%), Query Frame = -3 Query: 50 LGFPYLCGIDALFNEGVNFPPLKQ*GFWNTLLP-RLVKAI-EDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNGKPQW--KQVFLPSWHSTE 643 L F + L+ GV P F + P +VK I G+ + PP M +K W DEEF R+T+ G+NP I+ + E P +S LD + +G S IT E + +GG ++VE+AI+ KKLF LD+HD +PY+ ++ +T Y + IFFL GTL P+ IEL+ P G +V++P++ E Sbjct: 188 LEFDNFAEVHKLYEGGVTLPT----NFLSKYAPIPIVKEIFRSDGEQFLKYPPPKVMQVNKSAWMTDEEFARETIAGVNPNVIKSLEEFPPRSKLDTQSFGDHTSIITKEHLEINLGG-LTVEQAIQSKKLFILDHHDYLIPYLRRI-NASATKTYATRTIFFLKSDGTLAPLAIELSKPHPQGDEHGPVSEVYVPAYEGVE 383
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.496e-24 Identity = 66/169 (39.05%), Postives = 92/169 (54.44%), Query Frame = -3 Query: 50 LPRLVKAIEDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNGKPQ--WKQVFLPSWHSTE 550 LP L + G+ F PP + K W DEEF R+ L G+NP IR + E P +S LD ++YG S IT E + + G ++V+EAI+ K+LF L +HD +PY+ ++ ST Y + I FL GTLRP+ IEL+ P G + QVFLP+ E Sbjct: 328 LPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKEFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVDEAIQNKRLFLLGHHDPIMPYLRRI-NATSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVE 494
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.333e-24 Identity = 57/142 (40.14%), Postives = 84/142 (59.15%), Query Frame = -3 Query: 95 SGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNGK 520 +GD + P + DKF W DEEF R+ L G+NP I+ +T P KSTLD +YG S IT I + G+ +V+ A+K +LF LD+HD F+P+++K+ +L +Y S I L GTL+P+ IEL+ P +G+ Sbjct: 347 AGDQVLKLPLPHVIKEDKFAWRTDEEFAREMLAGVNPVMIKRLTNFPAKSTLDPNVYGDHTSKITEAHIKHNMEGL-TVQNALKGNRLFILDHHDHFMPFLDKINKLDGNFIYASRTILLLKDDGTLKPLAIELSLPHPDGQ 487
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 5.686e-24 Identity = 64/169 (37.87%), Postives = 92/169 (54.44%), Query Frame = -3 Query: 50 LPRLVKAIEDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNG--KPQWKQVFLPSWHSTE 550 LP + + G +I F P + + W DEEF R+ + G+NP IR + E P KS LD IYG S IT + + ++ G +++EA+ ++LF LDYHD+F+PYV ++ QL S Y + I FL GTL+P+ IEL+ P G QV LP+ E Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL--DLDGY-TMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23 Identity = 67/173 (38.73%), Postives = 93/173 (53.76%), Query Frame = -3 Query: 98 LFNEGVNFP--PLKQ*GFWNTLLPRLVKAIEDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNG 610 ++ EG++ P L N L L + G F P + DK W DEEF R+ L GLNP I+L+ E P KS LD E YG S IT I + G ++VEEA+++++LF LD+HD +PY+ +V +T Y S + FL GTL+P+ IEL+ P NG Sbjct: 308 IYEEGIDLPNQALIDSIVKNIPLEMLKEIFRTDGQKFLKFPVPQVIKEDKTAWRTDEEFAREMLAGLNPVVIQLLKEFPPKSKLDSESYGNQNSTITKSHIEHNLDG-LTVEEALEKERLFILDHHDTLMPYLGRV-NTTTTKTYASRTLLFLKDDGTLKPLVIELSLPHPNG 478
BLAST of CB290955 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.686e-23 Identity = 63/169 (37.28%), Postives = 93/169 (55.03%), Query Frame = -3 Query: 50 LPRLVKAIEDSGDNIFLFEPPVTMDRDKFFWFRDEEFFRQTLDGLNPYSIRLITESPLKSTLDLEIYGPPESAITPELILKEIGGMISVEEAIKQKKLFFLDYHDLFLPYVEKVRQLKSTTLYGSSPIFFLTPSGTLRPINIELTPPPMNG--KPQWKQVFLPSWHSTE 550 LP + + G+ + F PP + K W DEEF R+ + G+NP IR + E P KS LD IYG S IT + + ++ G +V+EA+ ++LF LDYHD+F+PY+ ++ Q + Y + I FL +GTL+P+ IEL+ P G QV LP+ E Sbjct: 339 LPVVKELFRTDGEQVLKFPPPHVIQVSKSAWMTDEEFAREMVAGVNPCVIRGLQEFPPKSNLDPTIYGEQTSKITADAL--DLDG-YTVDEALASRRLFMLDYHDVFMPYIRRINQTYAKA-YATRTILFLRENGTLKPVAIELSLPHPAGDLSGAVSQVILPAKEGVE 503 The following BLAST results are available for this feature:
BLAST of CB290955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290955 ID=CB290955; Name=CB290955; organism=Citrus sinensis; type=EST; length=645bpback to top |