CB290974

Overview
NameCB290974
Unique NameCB290974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.633e-44
Identity = 93/147 (63.27%), Postives = 111/147 (75.51%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V   HL ++G KLT L+K+QADYI+V  +GP+KP HYRY
Sbjct:  336 MKDEAIVCNIGHFDNEIDVASLKDYEWEN---IKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPFKPDHYRY 476          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_DESDG (Adenosylhomocysteinase OS=Desulfovibrio desulfuricans (strain G20) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.633e-44
Identity = 94/147 (63.95%), Postives = 106/147 (72.11%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK+ AIVCNIGHFDNEID+  LE       + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQV+AQLEL    S    E+KVY+LPK LDE+V   HL +LG KLT LT EQA+YI V   GP+KP HYRY
Sbjct:  337 MKDEAIVCNIGHFDNEIDMAYLEDSTECSCLNIKPQVDKWTLKSGRS-IIVLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQLEL---ASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY 479          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_SPHAL (Adenosylhomocysteinase OS=Sphingopyxis alaskensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.132e-44
Identity = 91/147 (61.90%), Postives = 108/147 (73.47%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKN AIVCNIGHFD+EI +  L  Y   K   +KPQ D   FP+    II+L++GRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW      +Y+  VYVLPKHLDEKV   HL KLGVKLT+LT++QADYI V  +GP+KP HYRY
Sbjct:  332 MKNMAIVCNIGHFDSEIQIAALANY---KWTEVKPQVDLVEFPDGKQ-IIILSKGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTRSE--QYQNDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY 472          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_RALEH (Adenosylhomocysteinase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.132e-44
Identity = 89/147 (60.54%), Postives = 107/147 (72.79%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    +I+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +GKY   VY LPKHLDEKV    L KL  +LT LT++QA YI V  +GPYK  HYRY
Sbjct:  330 MKDQAIVCNIGHFDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-LIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.132e-44
Identity = 89/147 (60.54%), Postives = 109/147 (74.15%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK++AI+ NIGHFDNEID+  LE   G  R+ IKPQ D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV   H+  LG +LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  349 MKDHAILGNIGHFDNEIDMAALER-SGATRLNIKPQVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.132e-44
Identity = 89/147 (60.54%), Postives = 109/147 (74.15%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK++AI+ NIGHFDNEID+  LE   G  R+ IKPQ D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV   H+  LG +LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  349 MKDHAILGNIGHFDNEIDMAALER-SGATRLNIKPQVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.132e-44
Identity = 90/147 (61.22%), Postives = 112/147 (76.19%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    ++VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V   HL ++G KLT LT++QADYI V  +GP+K  HYRY
Sbjct:  298 MKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLMVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.785e-44
Identity = 90/154 (58.44%), Postives = 111/154 (72.08%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT---IKPQ----TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            M N+AI+CNIGHFD EID+   E      + T   IKP      DR+ F +T   II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL++ +   KY  +VY+LPK LDE+V   HL  +GVKLT+LT+EQADYI V  +GPYKP HYRY
Sbjct:  295 MPNDAILCNIGHFDTEIDIAWAEQQVADGKATVSEIKPSDIGAVDRFTFNDTGRSIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQMELYQNRDNDKYGVQVYLLPKELDEEVARLHLEAIGVKLTKLTQEQADYIGVPVEGPYKPNHYRY 448          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.637e-44
Identity = 93/147 (63.27%), Postives = 112/147 (76.19%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK +AIVCNIGHFD+EI +  L     +K   IKPQ D   FP+    IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   +T KY+K VY+LPKHLDEKV   HL KLGV L++LT++QADYI V  +GP+KP HYRY
Sbjct:  324 MKQHAIVCNIGHFDSEIQINSLAN---MKWTEIKPQVDLVKFPDGKE-IIVLAKGRLVNLGCATGHPSFVMSASFTNQVLAQIELFC--NTDKYQKDVYMLPKHLDEKVAALHLPKLGVHLSKLTQKQADYIGVPVNGPFKPDHYRY 464          
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.637e-44
Identity = 89/147 (60.54%), Postives = 106/147 (72.11%), Query Frame = -3
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    +I+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +GKY   VY LPKHLDEKV    L KL  +LT LT +QA YI V  +GPYK  HYRY
Sbjct:  330 MKDQAIVCNIGHFDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-LIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTDQQAAYIGVKKEGPYKADHYRY 472          
The following BLAST results are available for this feature:
BLAST of CB290974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_SYNPW1.633e-4463.27Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_DESDG1.633e-4463.95Adenosylhomocysteinase OS=Desulfovibrio desulfuric... [more]
SAHH_SPHAL2.132e-4461.90Adenosylhomocysteinase OS=Sphingopyxis alaskensis ... [more]
SAHH_RALEH2.132e-4460.54Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_MYCLE2.132e-4460.54Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB2.132e-4460.54Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_COXB12.132e-4461.22Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_RHOBA2.785e-4458.44Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_ZYMMO3.637e-4463.27Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]
SAHH_CUPTR3.637e-4460.54Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02af12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02af12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290974 ID=CB290974; Name=CB290974; organism=Citrus sinensis; type=EST; length=733bp
CAATAAAGTAAACGAAAGCCCTCAAAGCCAGCAAAACTTAAAACTGCATC
AAATACAACATAATCCAACCCGGCCCCATCCAAAACCTTATTCAAATCCC
AAATGGGCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTC
CCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCTACTA
CAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCC
CTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAATACCTGTAA
TGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTG
CTCCTTGGTGAGCCTGGTGAGCTTAACTCCAAGTTTGCCAAGGTGAAAAA
CAACAACCTTCTCATCGAGGTGCTTGGGCAAAACATACACCTTCTTCTCG
TACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTG
ATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATC
CCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTC
TCGGGGAAAACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAAC
ACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAGTGAC
CAATGTTGCAAACAATTGCATTGTTCTTCATCT
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