CB291008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20 Identity = 62/155 (40.00%), Postives = 82/155 (52.90%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMS----QIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 D+ L +K + P ++T+VEQE N N F+ R E+ YY +LFDS+E +D RV E L R++ N VACEG DRVER E +WR R + GF KP+S SM L +G G+ V+E G + GW R L AWR Sbjct: 360 DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQD---RVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGF--KPVSIGSNAYKQASMLLALYAG---ADGYNVEENEGCLLLGWQTRPLIATSAWR 506
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.644e-20 Identity = 60/164 (36.59%), Postives = 89/164 (54.27%), Query Frame = -2 Query: 242 MPDESVSTEN-PRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAW 727 + DE+ S EN PRD +L+ ++ ++P V + N F++R EA +Y ALFD +ST+ RD+ R++ E E R+ N +ACE DRVER E + +W+ RM AGF+ K + + E R +L R + F V E + + GW GRTL W Sbjct: 465 LQDETGSEENCPRDAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKW-RYHKDFVVDENSKWLLQGWKGRTLYASSCW 627
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.247e-20 Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSA--------------RVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPM--SQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L +K ++P +VTLVEQE N N F+ R NEA YY +FDS+ES+ ++ V E L R++ N VACEG DRVER E +WR RM +GF+ + + SM L +G G+ V+E +G + GW R L AW+ Sbjct: 411 EKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAG---GDGYRVEENDGCLMLGWHTRPLIATSAWK 574
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 52/161 (32.30%), Postives = 88/161 (54.66%), Query Frame = -2 Query: 242 DESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAW 721 DE+V +PRD +L+ ++ ++P+V N N F+ R EA +Y A+FD +S + R+ R+ E E R++ N VACEG +RVER E + +W+AR+ AGF P+ + + ++++ ++ +G N F V + + GW GR + W Sbjct: 606 DETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKN--FDVDQNGNWLLQGWKGRIVYASSLW 764
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.374e-19 Identity = 58/155 (37.42%), Postives = 84/155 (54.19%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKV--EEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPM--SQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 + +L VK + P +VT+VEQE N N F+ R E+ YY LFDS+E + + + K+ E L +++ N VACEG +RVER E +WRAR+ AGF+ + + SM L +G G+ V+E NG + GW R L AW+ Sbjct: 424 ERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERHETLAQWRARLGSAGFDPVNLGSNAFKQASMLLALFAG---GDGYRVEENNGCLMLGWHTRPLIATSAWQ 575
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19 Identity = 55/152 (36.18%), Postives = 84/152 (55.26%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFE-LKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 ++++ VK + P ++T+VEQE N N FM R E+ YY LFDS+ES+ ++ ++ E L +++ N VACEG DRVE E +WR R+ +GFE + S ++ G+ G+ V+E NG + GW R L V AW+ Sbjct: 430 EKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESS--PNNQDKMMSEMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSSGFEPIHLGSNAFKQASMLLALFGS--GEGYRVEENNGSLTLGWHTRPLIVTSAWK 577
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.428e-18 Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGL-SRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 D L + GLSP V+ + EQ+++ N + M R+ E+ Y ALFD +E+ V R R+KVE+ L ++ N ++CEG +R ER E KW R+ +AGF P+S R RL G + G+ +KEE+G W R L V AWR Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQAR-RLLQGCGFD-GYRIKEESGCAVICWQDRPLYSVSAWR 479
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 54/152 (35.53%), Postives = 81/152 (53.29%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFE-LKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L VK + P +VT+VEQE N N F+ R E+ YY LFDS+E + + ++ E L +++ N VACEG DRVER E +WR R+ AGF+ + S ++ G+ G+ V+E G + GW R L AW+ Sbjct: 423 EKVLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECS--PNSQDKMMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFDPIHLGSNAFKQASILLALFGS--GEGYRVEENEGSLMLGWHTRPLIATSAWK 570
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18 Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE-------STVLRDHSA--------RVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLS--SGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L V+ + P +VT+VEQE N N+ F+ R E+ YY +FDS+E S V +A +V E L R++ N VACEG +R ER E G+WR R+ AGFE + + T L+ +G G+ V+E+ G + GW R L AWR Sbjct: 450 EKVLGTVRAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVYLGRQICNVVACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAG---GDGYKVEEKEGCLTLGWHTRPLIATSAWR 614
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 59/169 (34.91%), Postives = 86/169 (50.89%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE--------STVLRDHSA--------RVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLS--SGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L V+ + P +VT+VEQE N N+ F+ R E+ YY +FDS+E S V +A +V E L R++ N VACEG +R ER E G+WR R+ AGFE + + T L+ +G G+ V+E+ G + GW R L AWR Sbjct: 454 EKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGGSSGGGPSEVSSGAAAAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAG---GDGYKVEEKEGCLTLGWHTRPLIATSAWR 619 The following BLAST results are available for this feature:
BLAST of CB291008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291008 ID=CB291008; Name=CB291008; organism=Citrus sinensis; type=EST; length=731bpback to top |