CB291008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = -2 Query: 260 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEE-GLSRKLANSVACEGRDRVERCEVFGKWRARMRMAG---FELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTL 691 ++++ +K + P +VT+VEQE N N F+ R EA YY LFDS+E + + S + + E L R++ N VACEG DRVER E +WR RM AG L + + +SG+ G+ V+E NG + GW R L Sbjct: 383 EKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTRMETAGVSPVHLGSNAYKQASMLLALFASGD----GYRVEENNGCLMLGWHTRPL 526
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17 Identity = 55/153 (35.95%), Postives = 80/153 (52.29%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPM--SQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 D++L V + P + T+VEQE+N N+ F+ R E+ YY LFDS+E + +V E L +++ N VAC+G DRVER E +WR R AGF + + SM L +G G+ V+E +G + GW R L AW+ Sbjct: 382 DKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEG--VPSGQDKVMSEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGE---GYRVEESDGCLMLGWHTRPLIATSAWK 529
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 55/165 (33.33%), Postives = 85/165 (51.52%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE------------STVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLS--SGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L V+ + P +VT+VEQE N N+ F+ R E+ YY +FDS+E S + +V E L R++ N VACEG +R ER E G+WR+R+ +GF + + T L+ +G G+ V+E++G + GW R L AWR Sbjct: 462 EKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAG---GDGYRVEEKDGCLTLGWHTRPLIATSAWR 623
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 58/165 (35.15%), Postives = 84/165 (50.91%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIES-----TVLRDHSA-------RVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLS--SGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L V + P +VT+VEQE N N+ F+ R E+ YY +FDS+E L +A +V E L R++ N VACEG +R ER E G+WR R+ AGFE + + T L+ +G G+ V+E+ G + GW R L AWR Sbjct: 460 EKVLGTVHAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAG---GDGYRVEEKEGCLTLGWHTRPLIATSAWR 621
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17 Identity = 51/163 (31.29%), Postives = 83/163 (50.92%), Query Frame = -2 Query: 239 PDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 724 PDE+VS +PRD L+ + ++P + E N+ F+ R EA + +LFD E+T+ D + R VE E + R + +ACEG +R R E + +W+ R+ AGF +S+ I + + + R + F + +N + GW GR L V W+ Sbjct: 419 PDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVK--ERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 579
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16 Identity = 49/153 (32.03%), Postives = 82/153 (53.59%), Query Frame = -2 Query: 266 DESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGR 721 DE+V+ +PRD +L+ ++ + P V + N F+ R E +Y +LFD ++ + R+ RV E E R++ N VACEG +RVER E + +W+AR AGF P+ + + + ++ + SG + F V ++ + GW GR Sbjct: 532 DETVAVHSPRDTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKE-FDVDQDCHWLLQGWKGR 683
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L VK + P + T+VEQE+N N F+ R E+ YY LFDS+E + + +V E L +++ N VACEG DRVER E +W R +G + + LS N G+ V+E NG + GW R L AW+ Sbjct: 434 EKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEG--VPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNS-GQGYRVEESNGCLMLGWHTRPLITTSAWK 581
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPM--SQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 +++L VK + P + T+VEQE++ N F+ R E+ YY LFDS+E + +V E L +++ N VACEG DRVER E +W R +GF + + SM L +G G+ V+E NG + GW R L AW+ Sbjct: 427 EKVLGVVKQIKPVIFTVVEQESSHNGPVFLDRFTESLHYYSTLFDSLEG--VPSSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWANRFGSSGFAPAHLGSNAFKQASMLLALFNGGE---GYRVEENNGCLMLGWHTRPLITTSAWK 574
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16 Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = -2 Query: 242 PRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAW 697 PRD L+ ++ ++P+V + N F R EA +Y ALFD +T+ +++ R+ E E R++ N +ACEG DRVER E + +W+ RM AGF+ KP+ + + R ++ + F + E++ GW GR L W Sbjct: 508 PRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWG-YHKDFVLDEDSNWFLQGWKGRILFSSSCW 659
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16 Identity = 52/145 (35.86%), Postives = 72/145 (49.66%), Query Frame = -2 Query: 239 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 673 VK + P + T+VEQE+N N F+ R E+ YY LFDS+E +V E L +++ N VACEG DRVER E +W R +GF + + T L+ N G+ V+E NG + W R L AW+ Sbjct: 427 VKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGA--PSSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWSNRFGSSGFAPAHLGSNAFKQASTLLALFNG-GEGYRVEENNGCLMLSWHTRPLITTSAWK 568 The following BLAST results are available for this feature:
BLAST of CB291008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291008 ID=CB291008; Name=CB291008; organism=Citrus sinensis; type=EST; length=731bpback to top |