CB291008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL11_ARATH (Scarecrow-like protein 11 OS=Arabidopsis thaliana GN=SCL11 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15 Identity = 47/165 (28.48%), Postives = 84/165 (50.91%), Query Frame = -2 Query: 239 PDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSAR---VKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 724 PDE+VS ++PRD +L+ + ++P + E N+ FM R EA +Y +LFD ++T+ + + + E L R + ++CEG +R R E + +WR R+ AGF+ +S+ I + + + R + F + +N + GW GR + W+ Sbjct: 436 PDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVR--KRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWK 598
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 49/163 (30.06%), Postives = 81/163 (49.69%), Query Frame = -2 Query: 239 DESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNR-VNPGFPVKEENGGICFGWMGRTLPVVFAWR 721 DESV E+ RD +L + ++P + N F+ R EA ++ ++FD +E+ V R+ R+ +E E R+ N +ACEG +RVER E + +W R +G P P M+T L + + F + ++N + GW GRT+ + W+ Sbjct: 554 DESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFD---PSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWK 713
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSJ (Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.922e-14 Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = -2 Query: 239 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 673 ++ L+P VVT+VEQ+ + ++ F+AR EA YY ALFDS++++ D R VE+ LSR++ N +A G R + FG WR ++ +GF + ++ + + L G + G+ + EENG + GW L AWR Sbjct: 512 IQRLAPKVVTMVEQDLS-HSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAG--SAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR 653
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.922e-14 Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = -2 Query: 239 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 673 ++ L+P VVT+VEQ+ + ++ F+AR EA YY ALFDS++++ D R VE+ LSR++ N +A G R + FG WR ++ +GF + ++ + + L G + G+ + EENG + GW L AWR Sbjct: 512 IQRLAPKVVTMVEQDLS-HSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAG--SAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR 653
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.922e-14 Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = -2 Query: 239 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 673 ++ L+P VVT+VEQ+ + ++ F+AR EA YY ALFDS++++ D R VE+ LSR++ N +A G R + FG WR ++ +GF + ++ + + L G + G+ + EENG + GW L AWR Sbjct: 511 IQRLAPKVVTMVEQDLS-HSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAG--SAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR 652
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14 Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = -2 Query: 239 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 673 ++ L+P VVT+VEQ+ + ++ F+AR EA YY ALFDS++++ D R VE+ LSR++ N +A G R + FG WR ++ +GF + ++ + + L G + G+ + EENG + GW L AWR Sbjct: 503 IQRLAPKVVTMVEQDLS-HSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAG--SAAAQAVLLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR 644
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = -2 Query: 239 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 673 ++ L+P VVT+VEQ+ + ++ F+AR EA YY ALFDS++++ D R VE+ LSR++ N +A G R + FG WR ++ +GF ++ + + L G + G+ + EENG + GW L AWR Sbjct: 519 IQRLAPKVVTMVEQDLS-HSGSFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRAASLAG--SAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWR 660
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 51/163 (31.29%), Postives = 75/163 (46.01%), Query Frame = -2 Query: 242 ELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGL-SRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMS--QIIPESMRTRLSSGNRVNPGFPVKEEN-----------GGICFGWMGRTLPVVFAW 688 + L ++ +P + L EQE N+ RV + YY A+FD+I + + D RVKVEE L R++ N VACEG R ER F WR + GF +S +++ M R+ + N GF E + GG+ W + L + AW Sbjct: 493 DFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSD--NEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.660e-13 Identity = 54/154 (35.06%), Postives = 74/154 (48.05%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGL-SRKLANSVACE--GRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 D LR K L+P VVTL E E + N F RV A +Y A+F+S+E + RD RV+VE L R+++ + E G R ER E +WR M AGFE +S + L + N N V+ + G I W L + +WR Sbjct: 432 DTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCR_PEA (Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = -2 Query: 239 LSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 664 L+P VVT+VEQ+ + N F+ R EA YY ALFDS+ S+ + R VE+ LSR++ N +A G R + F WR +++ GF + +S + + L G + G+ + E+NG + GW L AWR Sbjct: 668 LAPKVVTVVEQDLS-NAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIK-FHNWREKLQQCGF--RGVSLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWR 806 The following BLAST results are available for this feature:
BLAST of CB291008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291008 ID=CB291008; Name=CB291008; organism=Citrus sinensis; type=EST; length=731bpback to top |