CB291025

Overview
NameCB291025
Unique NameCB291025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB2_METHJ (V-type ATP synthase beta chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.956e-15
Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++R L  + I PPI+ LP LSRLM   IG G TR DH +V++QLYA+YA G+D++ + A+VG                  E++F++QG  + R+I     +A  LF + P E    I  + +D+Y
Sbjct:  332 QIVLSRDLFRKGINPPIDALPCLSRLMNLGIGPGKTREDHRNVADQLYASYAYGRDLRRLVAIVGEEALSELDRNYLKFADHFEKRFISQGNVE-RSIETTLQVAWELFSLLPDEELKRIKEEYIDKY 458          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_ANADF (V-type ATP synthase beta chain OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.473e-15
Identity = 51/126 (40.48%), Postives = 66/126 (52.38%), Query Frame = -3
Query:  379 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLD 756
            QI ++R+L  R +YPPI+VLPSLSRLM    G G TR DH  +++QLYA YA G+DV+ M A+VG                  ER+ V QG   FR+I    +    L    P E    IP   L+
Sbjct:  328 QIVLSRELDRRGVYPPIDVLPSLSRLMGLGAGPGRTRADHRPLADQLYALYARGRDVRRMAAIVGSANLGEEERRLLEFGDRFERELVGQGD-AFRSIEDTLETGWRLLAQLPPEALARIPAAVLE 452          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRPM (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M28 GN=atpB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGLYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_METM7 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14
Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++R+L  + IYPP+++LPSLSRL  +  GEG TR DHS V +Q YA YA G+ ++ + AVVG                  E   V QG  + R+I +  D    L  I PRE    +  + +++Y
Sbjct:  331 QIVLSRELNRKGIYPPVDILPSLSRLAGNGQGEGKTRDDHSKVISQAYAAYAEGRGLRDLVAVVGEEALTERDRSFLKFADAFENSIVTQGVDEDRSIEETLDYVWDLLTILPREELKRVSDELIEKY 458          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_METM6 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14
Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++R+L  + IYPP+++LPSLSRL  +  GEG TR DHS V +Q YA YA G+ ++ + AVVG                  E   V QG  + R+I +  D    L  I PRE    +  + +++Y
Sbjct:  331 QIVLSRELNRKGIYPPVDILPSLSRLAGNGQGEGKTRDDHSKVISQAYAAYAEGRGLRDLVAVVGEEALTERDRSFLKFADAFENSIVTQGVDEDRSIEETLDYVWDLLTILPREELKRVSDELIEKY 458          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRPZ (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRPG (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRPF (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRPD (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRPC (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
The following BLAST results are available for this feature:
BLAST of CB291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
VATB2_METHJ4.956e-1537.50V-type ATP synthase beta chain 2 OS=Methanospirill... [more]
VATB_ANADF6.473e-1540.48V-type ATP synthase beta chain OS=Anaeromyxobacter... [more]
VATB_STRPM1.104e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_METM71.104e-1436.72V-type ATP synthase beta chain OS=Methanococcus ma... [more]
VATB_METM61.104e-1436.72V-type ATP synthase beta chain OS=Methanococcus ma... [more]
VATB_STRPZ1.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPG1.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPF1.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPD1.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPC1.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ba04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ba04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291025 ID=CB291025; Name=CB291025; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTTTTTTTTTAAGACCCACTTACGGGATAAATAGAATAATCTT
CAAACTTGGGCATTCTAATCCTCACTACCATGGTTTCAATATTGATAAAA
AGTATCCAAATCCCACTAATAAATAAAGATACAGGAATTACAAAATCTAA
AAAGCCCTCCCCTGAAAAAATATTTGCATCTTTTGACTAAACAAAAAGCT
TTGCACGGGGGCCTCAAGGGGACTACAACCTTTATTATTTCTGCTCAACG
GAAAAATGCAACCTATATCAAAAAGCTGGGGAATAAACAAATTGTCGACA
AAACCAACGAGGCAGCAAGGTACATGTCAGTACAAAAAACCTTCTTCATC
AATTAACTGCATCACGGCTGTAATACTGGTCAAGGGGCTTTCCTGGTATA
CAATGGAAAACCTCCCGAGGAAAGATGCAAAAAAGTGTCCTTGCCAAATC
AAAAAATTGGAAAATATTCCTAAAGTCATAAGCTCCTTGAGCAACAAATT
TTCTCTCAAACTTATCCAGGAACTCTAAGTACAGCAAATCCTCAAAAAAA
AGTGCTTCTTCTCCGACCACAGCCTTCATTGCCTGGACATCCTTCCCAAT
GGCATAATTTGCATACAGCTGGTTGGAAACATCGGAATGGTCCCTACGAG
TCATCCCCTCACCAATAACACTCTTCATCAAACGAGATAGGGATGGAAGG
ACATTGATCGGAGGATATATCTGTCTGTTCTGGAGCTGCCGGGCAATGTA
AATCTGCC
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