CB291025

Overview
NameCB291025
Unique NameCB291025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRPB (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRP8 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M18 GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRP6 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M6 GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRP3 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M3 GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRP1 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M1 GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++++L      PPINVLPSLSRL     GEG TR+DH+   NQL+A YA GK  + +  V+G                  E +++ QG Y  R+I +  DL   L  I PR     I    LD+Y
Sbjct:  328 QIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGFYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_METMP (V-type ATP synthase beta chain OS=Methanococcus maripaludis GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 46/128 (35.94%), Postives = 68/128 (53.12%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++R+L  + +YPP+++LPSLSRL  +  GEG TR DHS V +Q YA YA G+ ++ + AVVG                  E   V QG  + R+I +  D    L  I PRE    +  + +++Y
Sbjct:  331 QIVLSRELNRKGVYPPVDILPSLSRLAGNGQGEGKTRDDHSKVISQAYAAYAEGRGLRDLVAVVGEEALTERDRSFLKFADAFENSIVTQGVDEDRSIEETLDYVWDLLTILPREELKRVSDELIEKY 458          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_CLOBM (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = -3
Query:  364 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQYYSR 756
            QI ++R+L  + I PPI+VLPSLSRL    IG+G TR DH+D  NQL++ YA GK  + +  ++G                  E ++V+QG    R I +  +L   L  I P+     I  + L++Y S+
Sbjct:  326 QIILSRELYKKGIMPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFSAYAQGKQAKELSVILGESALSDTDKLYAKFADAFEEEYVSQGFTTNRTIEETLNLGWKLLTILPKSELKRIRDEYLEKYLSK 456          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_CLOBL (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = -3
Query:  364 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQYYSR 756
            QI ++R+L  + I PPI+VLPSLSRL    IG+G TR DH+D  NQL++ YA GK  + +  ++G                  E ++V+QG    R I +  +L   L  I P+     I  + L++Y S+
Sbjct:  326 QIILSRELYKKGIMPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFSAYAQGKQAKELSVILGESALSDTDKLYAKFADAFEEEYVSQGFTTNRTIEETLNLGWKLLTILPKSELKRIRDEYLEKYLSK 456          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_CLOBK (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Okra / Type B1) GN=atpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = -3
Query:  364 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQYYSR 756
            QI ++R+L  + I PPI+VLPSLSRL    IG+G TR DH+D  NQL++ YA GK  + +  ++G                  E ++V+QG    R I +  +L   L  I P+     I  + L++Y S+
Sbjct:  326 QIILSRELYKKGIMPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFSAYAQGKQAKELSVILGESALSDTDKLYAKFADAFEEEYVSQGFTTNRTIEETLNLGWKLLTILPKSELKRIRDEYLEKYLSK 456          
BLAST of CB291025 vs. ExPASy Swiss-Prot
Match: VATB_STRSV (V-type ATP synthase beta chain OS=Streptococcus sanguinis (strain SK36) GN=atpB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 49/128 (38.28%), Postives = 63/128 (49.22%), Query Frame = -3
Query:  373 QIYIARQLQNRQIYPPINVLPSLSRLMKSVIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGXXXXXXXXXXXXXXXXXXERKFVAQGAYDFRNIFQFFDLARTLFCIFPREVFHCIPGKPLDQY 756
            QI ++R+L N    PPINVLPSLSRL     GEG TR DH+   NQL+A YA GK  + +  V+G                  E++++ QG    R I +  DL   L  I PR     I    +DQY
Sbjct:  328 QIILSRELYNSGYRPPINVLPSLSRLKDKGSGEGKTRGDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVRFTDRFEQEYINQGFQTNRTIEESLDLGWELLSILPRTELKRIKDDMIDQY 455          
The following BLAST results are available for this feature:
BLAST of CB291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
VATB_STRPB1.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRP81.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRP61.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRP31.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRP11.442e-1437.50V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_METMP1.442e-1435.94V-type ATP synthase beta chain OS=Methanococcus ma... [more]
VATB_CLOBM1.442e-1435.11V-type ATP synthase beta chain OS=Clostridium botu... [more]
VATB_CLOBL1.442e-1435.11V-type ATP synthase beta chain OS=Clostridium botu... [more]
VATB_CLOBK1.442e-1435.11V-type ATP synthase beta chain OS=Clostridium botu... [more]
VATB_STRSV1.883e-1438.28V-type ATP synthase beta chain OS=Streptococcus sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ba04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ba04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291025 ID=CB291025; Name=CB291025; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTTTTTTTTTAAGACCCACTTACGGGATAAATAGAATAATCTT
CAAACTTGGGCATTCTAATCCTCACTACCATGGTTTCAATATTGATAAAA
AGTATCCAAATCCCACTAATAAATAAAGATACAGGAATTACAAAATCTAA
AAAGCCCTCCCCTGAAAAAATATTTGCATCTTTTGACTAAACAAAAAGCT
TTGCACGGGGGCCTCAAGGGGACTACAACCTTTATTATTTCTGCTCAACG
GAAAAATGCAACCTATATCAAAAAGCTGGGGAATAAACAAATTGTCGACA
AAACCAACGAGGCAGCAAGGTACATGTCAGTACAAAAAACCTTCTTCATC
AATTAACTGCATCACGGCTGTAATACTGGTCAAGGGGCTTTCCTGGTATA
CAATGGAAAACCTCCCGAGGAAAGATGCAAAAAAGTGTCCTTGCCAAATC
AAAAAATTGGAAAATATTCCTAAAGTCATAAGCTCCTTGAGCAACAAATT
TTCTCTCAAACTTATCCAGGAACTCTAAGTACAGCAAATCCTCAAAAAAA
AGTGCTTCTTCTCCGACCACAGCCTTCATTGCCTGGACATCCTTCCCAAT
GGCATAATTTGCATACAGCTGGTTGGAAACATCGGAATGGTCCCTACGAG
TCATCCCCTCACCAATAACACTCTTCATCAAACGAGATAGGGATGGAAGG
ACATTGATCGGAGGATATATCTGTCTGTTCTGGAGCTGCCGGGCAATGTA
AATCTGCC
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