CB291036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.682e-52 Identity = 94/176 (53.41%), Postives = 127/176 (72.16%), Query Frame = -2 Query: 313 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKV 840 + S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+ ++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++DF+ AV KV Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.682e-52 Identity = 94/176 (53.41%), Postives = 127/176 (72.16%), Query Frame = -2 Query: 313 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKV 840 + S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+ ++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++DF+ AV KV Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.682e-52 Identity = 94/176 (53.41%), Postives = 127/176 (72.16%), Query Frame = -2 Query: 313 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKV 840 + S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+ ++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++DF+ AV KV Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.502e-52 Identity = 104/178 (58.43%), Postives = 134/178 (75.28%), Query Frame = -2 Query: 307 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG-DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 837 GSELVQKY+GEG++MVRELF MAR I+F DE+D+IG R + G GG D+EVQRTMLE++NQLDGF++ NIK++MATNR D LDPALLRPGR+DRK+EF P+ +R I KIH+R MN R I +A + ++GA+I++ CTEAGMFA+R RR VT++D AV KV+K Sbjct: 223 GSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMK 400
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.574e-52 Identity = 97/188 (51.60%), Postives = 138/188 (73.40%), Query Frame = -2 Query: 277 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPK 840 +GSEL+QKY+G+G +MVRELF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KVLMATNR ++LDPAL+RPGR+DRK+EF LPD +++ +IF+IHT M +++ E +GADI+++CTEAG+ A+R RR VT +DF + V+ Y+K P+ Sbjct: 254 VGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVL--YRKKEGAPE 439
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 93/176 (52.84%), Postives = 134/176 (76.14%), Query Frame = -2 Query: 313 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKV 840 +GSELV+K++GEGA++VR++F++A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E PD + R +IFKIHT MN + + +A++ N GADI++VCTEAGMFAIR R+ VT KDF +A+ KV Sbjct: 214 VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKV 388
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 104/178 (58.43%), Postives = 135/178 (75.84%), Query Frame = -2 Query: 307 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG-DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 837 GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG +R + G GG D+EVQRTMLE++NQLDGF++ NIKVLM TNR D LDPALLRPGR+DRK+EF P R I KIH+R MN R I + ++ ++GA++++VCTEAGM+A+R RR V+++DF AV+KV+K Sbjct: 212 GSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMK 389
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.331e-51 Identity = 98/174 (56.32%), Postives = 128/174 (73.56%), Query Frame = -2 Query: 310 ELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVI 831 ELVQK++GEGAR+VRELF++AR K I+F DE+DAIG R D GD EVQRT+ +++ ++DGFD +IKV+ ATNR D LDPALLRPGR DR ++ LPD E R +IFKIHTR MN D+ + LA++ ++GADI+++CTEAGM AIR R VT DFL AV++V+ Sbjct: 248 ELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVM 421
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51 Identity = 93/176 (52.84%), Postives = 126/176 (71.59%), Query Frame = -2 Query: 313 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKV 840 + S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+ ++R I KIH + +I +E + +L GAD+ +VCTEAGMFAIRA V ++DF+ AV KV Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.872e-51 Identity = 90/184 (48.91%), Postives = 137/184 (74.46%), Query Frame = -2 Query: 289 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFS 840 +GSELV+K++GEGA++VR++F++A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R +I KIHT MN +++ +A+L N GAD+++VCTEAGMFAIR R+ + DF +A++K+ +K S Sbjct: 214 VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCS 396 The following BLAST results are available for this feature:
BLAST of CB291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291036 ID=CB291036; Name=CB291036; organism=Citrus sinensis; type=EST; length=841bpback to top |