CB291304

Overview
NameCB291304
Unique NameCB291304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD2B5_MOUSE (UDP-glucuronosyltransferase 2B5 OS=Mus musculus GN=Ugt2b5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = -2
Query:  253 EWLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTN-AKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 768
            E++    +  VV  S GS+ + ++  +   IA AL  I    LW            +G  P      T+    V  W PQ  +L HP    FVTH G + + E I  G+P+I  P + +Q  N A +VA    + L +R      +   ++   +EE+I  P   +YKKNA+ L
Sbjct:  295 EFVQSSGDHGVVVFSLGSMVSNMTEEKANAIAWALAQIPQKVLWKF----------DGKTPATLGHNTR----VYKWLPQNDLLGHPKTKAFVTHGGANGVYEAIYHGIPMIGIPLFGEQHDNIAHMVAKGAAVALNIRT-----MSKSDVLNALEEVIENP---FYKKNAIWL 446          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD19_HUMAN (UDP-glucuronosyltransferase 1-9 OS=Homo sapiens GN=UGT1A9 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  290 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 440          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD18_HUMAN (UDP-glucuronosyltransferase 1-8 OS=Homo sapiens GN=UGT1A8 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  290 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 440          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD17_HUMAN (UDP-glucuronosyltransferase 1-7 OS=Homo sapiens GN=UGT1A7 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  290 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 440          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD16_HUMAN (UDP-glucuronosyltransferase 1-6 OS=Homo sapiens GN=UGT1A6 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  292 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 442          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD15_HUMAN (UDP-glucuronosyltransferase 1-5 OS=Homo sapiens GN=UGT1A5 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  294 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 444          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD14_HUMAN (UDP-glucuronosyltransferase 1-4 OS=Homo sapiens GN=UGT1A4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  294 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 444          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD13_HUMAN (UDP-glucuronosyltransferase 1-3 OS=Homo sapiens GN=UGT1A3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  294 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 444          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD11_HUMAN (UDP-glucuronosyltransferase 1-1 OS=Homo sapiens GN=UGT1A1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  293 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 443          
BLAST of CB291304 vs. ExPASy Swiss-Prot
Match: UD110_HUMAN (UDP-glucuronosyltransferase 1-10 OS=Homo sapiens GN=UGT1A10 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/172 (29.07%), Postives = 79/172 (45.93%), Query Frame = -2
Query:  253 WLNKQSNSSVVYISFGSL-AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQTKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRLRPSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVEL 765
            ++N      +V  S GS+ +++   +   IA AL  I    LW             GT P        N  ++V W PQ  +L HP    F+TH G   + E+I  GVP++  P + DQ  NAK + +    G+ L   E   + +E+LE  ++ +IN    + YK+N + L
Sbjct:  290 YINASGEHGIVVFSLGSMVSEIPEKKAMAIADALGKIPQTVLWRYT----------GTRP----SNLANNTILVKWLPQNDLLGHPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRM-ETKGAGVTLNVLE---MTSEDLENALKAVIN---DKSYKENIMRL 440          
The following BLAST results are available for this feature:
BLAST of CB291304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
UD2B5_MOUSE7.090e-1129.31UDP-glucuronosyltransferase 2B5 OS=Mus musculus GN... [more]
UD19_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-9 OS=Homo sapiens GN... [more]
UD18_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-8 OS=Homo sapiens GN... [more]
UD17_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-7 OS=Homo sapiens GN... [more]
UD16_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-6 OS=Homo sapiens GN... [more]
UD15_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-5 OS=Homo sapiens GN... [more]
UD14_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-4 OS=Homo sapiens GN... [more]
UD13_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-3 OS=Homo sapiens GN... [more]
UD11_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-1 OS=Homo sapiens GN... [more]
UD110_HUMAN7.090e-1129.07UDP-glucuronosyltransferase 1-10 OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02cg06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02cg06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291304 ID=CB291304; Name=CB291304; organism=Citrus sinensis; type=EST; length=871bp
TTTTTTTTTTTTATGTAGCAATACTTGTTTATTTGGACCATCAACCTGTT
TTATTCTTGTAGTACTACTTTTATGACTTCATTTTACATCAAGCAATATT
GAAAATAAATATTAACCTATCATTGATGAAGCCAAATTTTCTCCACAACG
TGCCCCACGTTCACTATAATTTCCAAGAATCTCATCAGCAAACAACTGAA
TATTCTGGTCCGACGAACCGCCTCCGGCCACCGCCTGCCTTGCCGCATAC
TTCAATTCCACTGCATTTTTCTTGTAATACTCCGATTTCGGTCCATTAAT
AATTTCTTCAACACATTTCTCCAACTCCTCGTTGCCAACGAAGCCATCTT
CACTGGGCCTAAGCCTTAGACCTATCTTGAAAACATCGGCAACGAGTTTA
GCATTTGTTGGCTGATCGCTCCATTGAGGGTATGCAATCACTGGCACGCC
GGCGACGATTGTTTCCAGCAACGAACTCCAACCACAATGAGTCACAAAAC
AGGCAAGAGCAGGATGAGCTAACACTTTAGTTTGAGGACACCATGATACC
ACAAGGCCTCGGTTTTTAGTTTCTTCAAGAAACCATAACGGCAAAGTACC
CTCACCATCAGAAGAAGCAGATTCTGATTGCTTAACAATCCACAAAAATG
GAAGCTTAATGTTCTTCAAAGCTGTGGCTATGACCTCCATTTGATTAGCT
GATAACTGAGCAAGGCTACCAAATGATATGTAAACAACTGAAGAATTTGA
TTGCTTGTTAAGCCATTCTAAGCAACGATCTTCAGGCTTCCACCTTTCAA
CTCCAACATCAAGCTTTTCATCTTGGCCTAGCAATGAAGGTGGGACTAAA
GGACCGACAGGTCGTATTGGA
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