CB291322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL12_HUMAN (60S ribosomal protein L12 OS=Homo sapiens GN=RPL12 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.897e-62 Identity = 114/164 (69.51%), Postives = 139/164 (84.76%), Query Frame = -1 Query: 295 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 786 MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL12_BOVIN (60S ribosomal protein L12 OS=Bos taurus GN=RPL12 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.897e-62 Identity = 114/164 (69.51%), Postives = 139/164 (84.76%), Query Frame = -1 Query: 295 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 786 MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL12_CHILA (60S ribosomal protein L12 OS=Chinchilla lanigera GN=RPL12 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.430e-61 Identity = 113/164 (68.90%), Postives = 139/164 (84.76%), Query Frame = -1 Query: 295 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 786 MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VD + P D+ +I +G VE P Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDNRHPHDIIDDINNGVVECP 163
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL12_NEUCR (60S ribosomal protein L12 OS=Neurospora crassa GN=rpl-12 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.275e-59 Identity = 110/164 (67.07%), Postives = 139/164 (84.76%), Query Frame = -1 Query: 295 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 786 MPPKFDP++V + +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVTVKLT+QNRQA V+VVP+A+ALVI+ALKEP RDRKK KNIKHN +++ D+++EIA+ MR +S +K+L GTV E+LGT SVGC VDGK PK +Q+ I G++++P Sbjct: 1 MPPKFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVTVKLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKSFSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL12_YEAST (60S ribosomal protein L12 OS=Saccharomyces cerevisiae GN=RPL12A PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.687e-54 Identity = 104/164 (63.41%), Postives = 134/164 (81.71%), Query Frame = -1 Query: 295 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 786 MPPKFDP++V +Y+R GGEVGA+++LAPKIGPLGLSPKK+GEDIAK T K++KG++VTV+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++IEIA+ MR +S + L+ KEILGT SVGC VD K+P D+ + I G++EIP Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKAT-KEFKGIKVTVQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKSFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL12_DICDI (60S ribosomal protein L12 OS=Dictyostelium discoideum GN=rpl12 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.687e-54 Identity = 104/163 (63.80%), Postives = 133/163 (81.60%), Query Frame = -1 Query: 298 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEI 786 MPPK DPS+ V+V++RV GGE GA S+LAPK+GPLG+SPKK+G+DIAK T + WKG++V+VKLT+QNR A V+PSA+ALVIKALKEP RDRKK KNIKHNGNI L+++ +IAK MR +S+A D G+V EILGT SVGC V+GK P+D+Q I G++E+ Sbjct: 1 MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKAT-QPWKGMKVSVKLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKSLAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEV 162
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL12_ENCCU (60S ribosomal protein L12 OS=Encephalitozoon cuniculi GN=RPL12 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.174e-39 Identity = 83/153 (54.25%), Postives = 117/153 (76.47%), Query Frame = -1 Query: 295 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMR-PRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 750 + ++V GGEV A+ LA ++GPLGLS K +GEDI K TA D+K L+V V+L +++R+A V V PS A L+IK+LKEP RDRKK KNI HNG++ + +V++IA++ R RS + LSGTVKE+LGTC S+GC VDGK PK++ +EI G++++P Sbjct: 14 IKLQVVGGEVPGAT-LAQRVGPLGLSSKVVGEDIKKATA-DYKSLKVHVQLAIKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLP 164
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL11_ARCFU (50S ribosomal protein L11P OS=Archaeoglobus fulgidus GN=rpl11p PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.441e-21 Identity = 62/158 (39.24%), Postives = 98/158 (62.03%), Query Frame = -1 Query: 295 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN-RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIP 762 QVV+V V GG+ L P IGPLGL+ K++ + I E KD++GL V VK+ V++ R ++ V +P +AL+ + L + + + GN+T++ ++ IA++ R +S++ L VKE+LGTC S+G TV+GK PK+L + I +G VEIP Sbjct: 3 QVVEVLV--PGGQASPGPPLGPAIGPLGLNVKQVVDKI-NEATKDYEGLSVPVKIIVKDDRSFEIEVGIPPVSALIKRELGIEKGASNPGREVV--GNLTMEQLLNIARIKRQQSLSYTLKEVVKEVLGTCNSMGITVEGKSPKELTRMIEEGQVEIP 155
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL11_THEON (50S ribosomal protein L11P OS=Thermococcus onnurineus (strain NA1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.882e-21 Identity = 62/157 (39.49%), Postives = 96/157 (61.15%), Query Frame = -1 Query: 310 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 762 QVV+V V GG+ L P IGPLGL+ K++ ++I K T KD++G++V VK+ V++ + K VP + L+ K L P K + H+ GN+T++ VI IAK + +A DL KE++GT +S+G TV+GKDP+++Q+EI +G Sbjct: 3 QVVEVLVE--GGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KDFEGMQVPVKIIVEDPKKKTFRIEVGVPPVSQLIKKELGIP----KGSSEAGHSPVGNLTMEQVIRIAKAKMDQMLAADLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
BLAST of CB291322 vs. ExPASy Swiss-Prot
Match: RL11_PYRFU (50S ribosomal protein L11P OS=Pyrococcus furiosus GN=rpl11p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = -1 Query: 310 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 768 P QVV+V V GG+ L P IGPLGL+ K++ + I E KD+ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ + + +A L KE++GT +S+G TV+GKDP+++Q+EI +G Sbjct: 2 PKQVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKDFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKKDQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152 The following BLAST results are available for this feature:
BLAST of CB291322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291322 ID=CB291322; Name=CB291322; organism=Citrus sinensis; type=EST; length=837bpback to top |