CB293077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: HINT1_PONAB (Histidine triad nucleotide-binding protein 1 OS=Pongo abelii GN=HINT1 PE=2 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 4.799e-30 Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLL*GRQMNWPPG 351 TIF KII K+IP+K+++EDD+ L+F D+ PQAPTH L+IPK + ++ +S AE+ + +LG L+ K A GL G+R+V+N+G +GGQSV+H+H+H+L GRQM+WPPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: HINT1_HUMAN (Histidine triad nucleotide-binding protein 1 OS=Homo sapiens GN=HINT1 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 8.185e-30 Identity = 58/112 (51.79%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLL*GRQMNWPPG 351 TIF KII K+IP+K+++EDD+ L+F D+ PQAPTH L+IPK + ++ +S AE+ +LG L+ K A GL G+R+V+N+G +GGQSV+H+H+H+L GRQM+WPPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: HINT_CAEEL (Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis elegans GN=hint-1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.823e-29 Identity = 57/112 (50.89%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLL*GRQMNWPPG 351 T+F KII K+IP+K+++EDD+ L+F DV PQAP H L+IPK + L A + ++G+L+ TA VAKQ G+ +G+R+V+N+G +G QSVFH+H+H+L GRQ+ WPPG Sbjct: 21 TLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDM--LENAVDSDAALIGKLMVTASKVAKQLGMANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: YHIT_SYNY3 (Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp. (strain PCC 6803) GN=slr1234 PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.470e-27 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLL*GRQMNWPPG 351 TIF KII ++IP+ +VYEDD L+F+DV PQAP H+L+IPK L LS A +LG LL AK VA G+ D FR+VIN+G GQ+VFH+H+H+L GR +WPPG Sbjct: 5 TIFSKIIRREIPAAIVYEDDLCLAFKDVNPQAPVHVLLIPK--KPLPQLSAATPEDHALLGHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHILGGRPFSWPPG 114
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: YHIT_AQUAE (Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus GN=aq_141 PE=4 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.070e-25 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 19 IFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQ------EGLEDGFRIVINDGPNGGQSVFHIHVHLL*GRQMNWPPG 351 IF KI+ ++P+K VYEDDKVL+F D+ P AP HILIIPK + + G+ E ++G + Y A+ +A+ E L G+R+V N G + GQSVFH+H+HL+ GR+M+WPPG Sbjct: 7 IFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKH--IMGIQTLEPEDECLVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREMSWPPG 121
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: HINT_SHIFL (HIT-like protein hinT OS=Shigella flexneri GN=hinT PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.035e-24 Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLL*GRQM 336 TIF KII ++IPS +VY+DD V +FRD+ PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+HLL GR + Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: HINT_ECOLI (HIT-like protein hinT OS=Escherichia coli (strain K12) GN=hinT PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.035e-24 Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLL*GRQM 336 TIF KII ++IPS +VY+DD V +FRD+ PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+HLL GR + Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: HINT_ECO57 (HIT-like protein hinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.035e-24 Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLL*GRQM 336 TIF KII ++IPS +VY+DD V +FRD+ PQAPTHILIIP + + ++ H + LGR++ A +A+QEG+ EDG+R+++N +GGQ V+HIH+HLL GR + Sbjct: 5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: Y961_HAEIN (HIT-like protein HI0961 OS=Haemophilus influenzae GN=HI0961 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22 Identity = 52/108 (48.15%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVNDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLL*GRQM 336 TIF KII K+IP+ +VY+D+ V +FRD+ PQA THILIIP N + ++ E+ LGRL A +AK+EG+ EDG+R+++N +GGQ VFH+H+HL+ G + Sbjct: 5 TIFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIP--NKVIPTVNDVTEQDEVALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPL 110
BLAST of CB293077 vs. ExPASy Swiss-Prot
Match: PKIA_DICDI (Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21 Identity = 51/114 (44.74%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 16 TIFDKIINKKIPSKVVYEDDKVLSFRDVEPQAPTHILIIPKVN-DGLTGLSKAE-ERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLL*GRQMNWPPG 351 TIF KII+ IPSK Y+D+ ++ D+ PQAP H+L+IPK+ GL+ ++ + E++ E +G ++ +A +G D +R+VIN+G G QSV +H+H+L GRQMNWPPG Sbjct: 15 TIFAKIISGAIPSKKFYDDEYCIAIEDINPQAPVHLLVIPKLAVGGLSDVANVDLEKYKESMGHIMSKIHHIASLKGA-DSYRLVINEGVLGQQSVRWLHIHILGGRQMNWPPG 127 The following BLAST results are available for this feature:
BLAST of CB293077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293077 ID=CB293077; Name=CB293077; organism=Citrus sinensis; type=EST; length=540bpback to top |