CB293158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.023e-31 Identity = 83/203 (40.89%), Postives = 125/203 (61.58%), Query Frame = 3 Query: 12 DLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQK-CNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME----GYQVNTLQLNPSAEDCGYGLKPAQPQGDT 605 ++KRIEN N TF KRRNGLLKKAYELSVLCDAE AL++FSNRG+LYE+ +++S+ T+ERY+K C+ + +VS EA QQE KL+A+ L RN++GE L + KEL++LE++++ + +IRS + + + + +Q +E L N+ L+ ++ E +Q + L P + + L P Q DT Sbjct: 23 EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEY-ANNSVKATIERYKKACSDSSNTGSVS--EANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELVPPPQQFDT 222
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.336e-31 Identity = 84/203 (41.38%), Postives = 125/203 (61.58%), Query Frame = 3 Query: 12 DLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQK-CNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME----GYQVNTLQLNPSAEDCGYGLKPAQPQGDT 605 ++KRIEN N TF KRRNGLLKKAYELSVLCDAE ALI+FS+RG+LYE+ +++S+ T+ERY+K C+ + ++S EA QQE KL+A+ LQ RN+LGE L L+ ++L++LE++++ + +IRS + + + + +Q +E L N+ L+ ++ E Q Q+N Y L P Q DT Sbjct: 23 EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVKATIERYKKACSDSSNTGSIS--EANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDT 222
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.336e-31 Identity = 81/197 (41.12%), Postives = 119/197 (60.41%), Query Frame = 3 Query: 12 DLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGD 602 ++KRIEN N TF KRRNGLLKKAYELSVLCDAE ALI+FS+RG+LYE+ +++S+ T+ERY+K + S EA QQE KL+A+ LQ RN LGE L LN ++L +LE++++ + +IR+ + + + + +Q +E L N+ L+ ++ E + + L P + Y L P Q D Sbjct: 23 EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVKATIERYKKACSDSSNTG-SIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQMNLMPGSS--SYDLVPPQQSFD 215
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.887e-31 Identity = 76/170 (44.71%), Postives = 112/170 (65.88%), Query Frame = 3 Query: 12 DLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQK-CNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 518 ++KRIEN N TF KRRNGLLKKAYELSVLCDAE AL+IFS RG+LYE+ +++S+ T+ERY+K C+ P ++ EA QQE KL+ + +Q R++LGE LG LN KEL++LE +L+ + ++RS + + ++ + +Q +E L N L+ ++ E Sbjct: 22 EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-ANNSVRGTIERYKKACSDAVNPPTIT--EANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITE 188
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.076e-31 Identity = 79/188 (42.02%), Postives = 116/188 (61.70%), Query Frame = 3 Query: 12 DLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQ-VNTLQLNPSAEDCGY 572 ++KRIEN N TF KRR+GLLKKAYELSVLCDAE AL++FS+RG+LYE+ S++S+ +T+ERY+K N + A E QQE KLK + LQ S R L+G+ + +N +EL+ LE +LD L +IR+ + + + + +Q +E L N LK ++ E + + T+ + SA Y Sbjct: 49 EIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY-SNNSVKETIERYKKANSDTSNASTVA-EINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMMGSASTSEY 234
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.131e-30 Identity = 80/167 (47.90%), Postives = 107/167 (64.07%), Query Frame = 3 Query: 9 SDLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 509 +++KRIEN + TF+KRRNGLLKKA+ELSVLCDAE ALIIFS RGKLYEF SSSS+ KT+ERYQK + R S+ E L + E L+ S R ++GE L + +EL+ LE QLD SL +IR+ + Q + + +L+ KE+ L NK L ++ Sbjct: 6 TEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNH--KRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEK 170
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.519e-30 Identity = 83/212 (39.15%), Postives = 127/212 (59.91%), Query Frame = 3 Query: 9 SDLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQ---EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDT---FFHALEC 626 + +KRIEN + TF+KRRNGLLKKA+ELSVLCDAE +LIIFS +GKLYEF +SS+M T++RY + + VS + E + Q E + + E L+ S+R LLGE +G + +EL+ +E+QL+ S+K IR+ +TQ + + +L+ KE+ L+ N+ L ++ G + + N + E G G + + P + F L C Sbjct: 6 TQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEF-ASSNMQDTIDRYLR----HTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKW--GSHESEVWSNKNQESTGRGDEESSPSSEVETQLFIGLPC 210
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.297e-30 Identity = 76/185 (41.08%), Postives = 118/185 (63.78%), Query Frame = 3 Query: 12 DLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL--MEGYQVNTLQLNPSAE 560 ++KRIEN N TF KRRNGLLKKAYELSVLCDAE ALI+FS RG+LYE+ +++++ T+ERY+K + + + +E QQE KL+ + + +Q S RNL+G+ L L+ KEL+ +E +L+ ++ +IRS + + +L + Q +E L N L+ ++ +E YQ + Q+ +E Sbjct: 7 EIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY-ANNNIRSTIERYKKACSDSTNTS-TVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQHHHQMVSGSE 189
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.785e-29 Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = 3 Query: 9 SDLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLK 503 ++LKRIEN + TF+KRRNGLLKKA+ELSVLCDAE ALI+FS RG+LYEF S+ S+ KT++RY+ Y N + + + L L + EAL S+R +LGE L + +EL LE +L+ SL +IR +T+ + + +L+ KE+ L + N+ L+ Sbjct: 6 TELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKA--YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168
BLAST of CB293158 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.751e-29 Identity = 70/177 (39.55%), Postives = 114/177 (64.41%), Query Frame = 3 Query: 12 DLKRIENKINTLETFAKRRNGLLKKAYELSVLCDAEDALIIFSNRGKLYEFCSSSSMLKTLERYQKCN-----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQ 527 ++KRIEN + TF KRRNGLLKKAYELSVLCDAE ALI+FS+RG+LYE+ +++++ T++RY+K + GAP V+A++ QQE KL+ + + LQ + ++L+G+ + L+ KEL+ LE +L+ + +IR+ + + + + + +E L N L+ ++ E Q Sbjct: 7 EIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYY----QQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQ 179 The following BLAST results are available for this feature:
BLAST of CB293158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293158 ID=CB293158; Name=CB293158; organism=Citrus sinensis; type=EST; length=770bpback to top |