CB293224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA7 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain PA7) GN=lldD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.239e-34 Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 230 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHIS 658 D +SWKDLEW+R N P++IKGIL EDA AV+ G GI+VSNHG RQLD ++ AL + AVKG + IL D G+R G DV + +ALGA +VL+GR VY LAA GE GVR ++E+++ E + M LTG S+ IS Sbjct: 229 DPSISWKDLEWIREFWNGPMVIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEIS 371
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: CYB2_HANAN (Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.819e-34 Identity = 69/149 (46.31%), Postives = 104/149 (69.80%), Query Frame = -3 Query: 230 MDGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGR-----VPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHIS 661 +D LSWKD+ +++SIT +PI+IKG+ +ED + A E G+ G+++SNHG RQLDY+ A + L EV+ +K R + I +DGGVRRGTDV KAL LGA+ V +GRP +Y +++ G+ GV + I++LKDE E+ M L G ++ ++ Sbjct: 385 IDPSLSWKDIAFIKSITKMPIVIKGVQRKEDVLLAAEHGLQGVVLSNHGGRQLDYTRAPVEVLAEVMPILKERGLDQKIDIFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYAMSSYGDKGVTKAIQLLKDEIEMNMRLLGVNKIEELT 533
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAE (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa GN=lldD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.508e-34 Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 230 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHIS 658 D +SWKDLEW+R + P++IKGIL EDA AV+ G GI+VSNHG RQLD ++ AL + AVKG + IL D G+R G DV + +ALGA +VL+GR VY LAA GE GVR ++E+++ E + M LTG S+ IS Sbjct: 229 DPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEIS 371
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA8 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain LESB58) GN=lldD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.508e-34 Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 230 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHIS 658 D +SWKDLEW+R + P++IKGIL EDA AV+ G GI+VSNHG RQLD ++ AL + AVKG + IL D G+R G DV + +ALGA +VL+GR VY LAA GE GVR ++E+++ E + M LTG S+ IS Sbjct: 229 DPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEIS 371
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.895e-33 Identity = 72/143 (50.35%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 230 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHIS 658 D ++WKDLEW+R + P++IKGIL EDA AV+ G GI+VSNHG RQLD ++ AL + AVKG + IL D G+R G DV + +ALGA +VL+GR VY LAA GE GVR ++E+++ E + M LTG S+ IS Sbjct: 229 DPSIAWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEIS 371
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.233e-33 Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = -3 Query: 233 MDGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVV-----HAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHI 661 +D L+WKD+E ++ T LPI+IKG+ ED IKA E+GV+G+++SNHG RQLD+S A I L E + +K ++ + +DGGVRRGTDV KAL LGA+ V +GRP +Y + G GV + IE+L+DE E++M L G S+ + Sbjct: 406 IDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAEL 553
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.223e-33 Identity = 69/144 (47.92%), Postives = 94/144 (65.28%), Query Frame = -3 Query: 227 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHISR 658 D +SWKDLEW+R + P++IKGIL EDA AV G GI+VSNHG RQLD +T+ AL + AVKG + IL+D G+R G DV + LALGA ++GR +Y LAA+G GV ++++ + E + M LTG S+ +SR Sbjct: 229 DPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAKSIAELSR 372
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.223e-33 Identity = 69/144 (47.92%), Postives = 94/144 (65.28%), Query Frame = -3 Query: 227 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHISR 658 D +SWKDLEW+R + P++IKGIL EDA AV G GI+VSNHG RQLD +T+ AL + AVKG + IL+D G+R G DV + LALGA ++GR +Y LAA+G GV ++++ + E + M LTG S+ +SR Sbjct: 229 DPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAKSIAELSR 372
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_ENTS8 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=lldD PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.203e-33 Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 224 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHISRK 658 D +SWKDLEW+R + P++IKGIL EDA AV G GI+VSNHG RQLD ++ AL + AVKG + IL D G+R G DV + +ALGA +VL+GR +Y LA GE GV ++ +++ E + M LTG S+K I+R+ Sbjct: 229 DPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDITILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGEKGVANLLNLIEKEMRVAMTLTGAKSIKEITRE 373
BLAST of CB293224 vs. ExPASy Swiss-Prot
Match: LLDD_ENT38 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sp. (strain 638) GN=lldD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.407e-33 Identity = 72/158 (45.57%), Postives = 100/158 (63.29%), Query Frame = -3 Query: 185 DGFLSWKDLEWVRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHISRKHVRTEQERIHSML 658 D +SWKDLEW+R + P++IKGIL EDA AV G GI+VSNHG RQLD ++ AL + AVKG + IL D G+R G DV + +ALGA +VL+GR +Y LA G+ GV ++ +++ E ++ M LTG ++ IS+ + E RI S L Sbjct: 229 DPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGQAGVANLLNLIEKEMKVAMTLTGAKTISEISKDSLVQELSRIPSGL 386 The following BLAST results are available for this feature:
BLAST of CB293224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293224 ID=CB293224; Name=CB293224; organism=Citrus sinensis; type=EST; length=783bpback to top |