CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEE4 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas entomophila (strain L48) GN=fadB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.355e-40 Identity = 88/236 (37.29%), Postives = 128/236 (54.24%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 V +G+LT K AL ++ L Y +F +VD+V+EAV+E+ +KQ + +E+E ILA+NTSTI +N++ + + +G HFF+P H+MPL+E++R E++S + + +C GF VNR FPY LVS GVD RID + FG P+GP L+D+ G + FPDR + VD L ++ R G+ NGKG Y YE K KP Sbjct: 365 VEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSESM (Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae pv. tomato GN=fadB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40 Identity = 84/231 (36.36%), Postives = 127/231 (54.98%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 +G+LT K AL ++ L Y +F +VD+V+EAV+E+ +KQ + +E+E + ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++S + + + +C GF VNR FPY LVS GVD RID + FG P+GP L+D+ G + FPDR + VD L ++ R G+ NGKG Y YE K Sbjct: 367 KGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYVYETDKK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEU2 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.161e-39 Identity = 83/231 (35.93%), Postives = 126/231 (54.55%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 +G+LT K AL ++ L Y +F +VD+V+EAV+E+ +KQ + +E+E + ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++S + + + +C GF VNR FPY LVS GVD RID + FG P+GP L+D+ G + FPDR + +D L + R G+ NGKG Y YE K Sbjct: 367 KGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKNGKGFYAYETDKK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEPF (Fatty acid oxidation complex subunit alpha OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.830e-38 Identity = 83/233 (35.62%), Postives = 125/233 (53.65%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V +G++T K L ++ L Y +F VD+V+EAV+E+ +KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++S I + +C GF VNR FPY LVS GVD RID + FG P+GP L+D+ G + FPDR + +D+L ++ R G+ NGKG Y YE K Sbjct: 365 VDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEFR (Fatty acid oxidation complex subunit alpha OS=Pseudomonas fragi GN=fadB PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.390e-38 Identity = 82/233 (35.19%), Postives = 125/233 (53.65%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V +G++T K L ++ L Y +F +VD+V+EAV+E+ +KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++S + + +C GF VNR FPY LVS GVD RID + FG P+GP L+D+ G + FPDR + +D L ++ R G+ NGKG Y YE K Sbjct: 365 VDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEF5 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadB PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.390e-38 Identity = 83/233 (35.62%), Postives = 126/233 (54.08%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V +G++T K L ++ L Y +F +VD+V+EAV+E+ +KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++S + + +C GF VNR FPY LVS GVD RID + FG P+GP L+D+ G + FPDR + VD+L ++ R G+ NGKG Y YE K Sbjct: 365 VDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQIVLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEAE (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa GN=fadB PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.390e-38 Identity = 85/236 (36.02%), Postives = 126/236 (53.39%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 V +G+LT K AL ++ + Y +F +VD+V+EAV+E+ +KQ + +E+E A I+A+NTSTI ++++ + + G HFF+P H+MPL+E++R E+T I + +C GF VNR FPY L+S GVD RID + FG P+GP L D+ G + FPDR VD++ ++ R G+ NGKG Y YE K KP Sbjct: 365 VEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVRIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEAB (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadB PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.390e-38 Identity = 85/236 (36.02%), Postives = 126/236 (53.39%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 V +G+LT K AL ++ + Y +F +VD+V+EAV+E+ +KQ + +E+E A I+A+NTSTI ++++ + + G HFF+P H+MPL+E++R E+T I + +C GF VNR FPY L+S GVD RID + FG P+GP L D+ G + FPDR VD++ ++ R G+ NGKG Y YE K KP Sbjct: 365 VEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVRIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEA8 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa (strain LESB58) GN=fadB PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.390e-38 Identity = 85/236 (36.02%), Postives = 126/236 (53.39%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 V +G+LT K AL ++ + Y +F +VD+V+EAV+E+ +KQ + +E+E A I+A+NTSTI ++++ + + G HFF+P H+MPL+E++R E+T I + +C GF VNR FPY L+S GVD RID + FG P+GP L D+ G + FPDR VD++ ++ R G+ NGKG Y YE K KP Sbjct: 365 VEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVRIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSYA2 (Fatty acid oxidation complex subunit alpha OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.121e-38 Identity = 83/237 (35.02%), Postives = 126/237 (53.16%), Query Frame = 1 Query: 49 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 +V RGK+T K L ++ L+Y +F + D+VIEAV+E+ +K+ + E+E CILA+NTSTI + + E + +G HFF+P H MPL+E++R E++S + I + +C GF VNR FPY + LL+ G D +D + FG P+GP L+D+ G ++ + FPDR ++LL ++ R G+ NG G Y YE K KP Sbjct: 365 MVDRGKMTPAKMGETLSRIRPTLNYGDFAETDIVIEAVVENPNVKRAVLKEVEGLVKDDCILASNTSTISITFLAEALERPENFVGMHFFNPVHRMPLVEVIRGEKSSEEAIATTVALASKMGKVPVVVNDCPGFLVNRVLFPYFGAFDLLLKQGADFAHVDKVMEKFGWPMGPAYLIDVVGLDTGVHGAEVMAEGFPDRMKPDYKGAIELLYENKRLGQKNGVGFYKYEMDKRGKP 601 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |