CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECO55 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain 55989 / EAEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.724e-32 Identity = 80/234 (34.19%), Postives = 121/234 (51.71%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G V ID+ + FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAVLVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_YERPP (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis (strain Pestoides F) GN=fadJ PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 1 Query: 94 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 + ++ G DY F+ VD+V+EAV E + LKQ++ +++E+ H I A+NTS++ ++ + +++IG H+FSP MPL+E++ E+TS + I + + GF VNR PY A + G + +D+A+ FG P+GP LLD G VA + R P D++LK GR G+ NG+G Y Y +K Sbjct: 408 MMLISGSTDYRGFERVDIVVEAVFEDLSLKQQMVADIERFGAAHTIFASNTSSLPISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIPHEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDNALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAPPSFDVILKDGRKGRKNGRGFYLYSNPTK 624
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_YERPN (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadJ PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 1 Query: 94 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 + ++ G DY F+ VD+V+EAV E + LKQ++ +++E+ H I A+NTS++ ++ + +++IG H+FSP MPL+E++ E+TS + I + + GF VNR PY A + G + +D+A+ FG P+GP LLD G VA + R P D++LK GR G+ NG+G Y Y +K Sbjct: 381 MMLISGSTDYRGFERVDIVVEAVFEDLSLKQQMVADIERFGAAHTIFASNTSSLPISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIPHEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDNALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAPPSFDVILKDGRKGRKNGRGFYLYSNPTK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_YERPE (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis GN=fadJ PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 1 Query: 94 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 + ++ G DY F+ VD+V+EAV E + LKQ++ +++E+ H I A+NTS++ ++ + +++IG H+FSP MPL+E++ E+TS + I + + GF VNR PY A + G + +D+A+ FG P+GP LLD G VA + R P D++LK GR G+ NG+G Y Y +K Sbjct: 381 MMLISGSTDYRGFERVDIVVEAVFEDLSLKQQMVADIERFGAAHTIFASNTSSLPISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIPHEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDNALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAPPSFDVILKDGRKGRKNGRGFYLYSNPTK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_YERPA (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 1 Query: 94 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 + ++ G DY F+ VD+V+EAV E + LKQ++ +++E+ H I A+NTS++ ++ + +++IG H+FSP MPL+E++ E+TS + I + + GF VNR PY A + G + +D+A+ FG P+GP LLD G VA + R P D++LK GR G+ NG+G Y Y +K Sbjct: 381 MMLISGSTDYRGFERVDIVVEAVFEDLSLKQQMVADIERFGAAHTIFASNTSSLPISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIPHEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDNALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAPPSFDVILKDGRKGRKNGRGFYLYSNPTK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_YERP3 (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadJ PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 1 Query: 94 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 + ++ G DY F+ VD+V+EAV E + LKQ++ +++E+ H I A+NTS++ ++ + +++IG H+FSP MPL+E++ E+TS + I + + GF VNR PY A + G + +D+A+ FG P+GP LLD G VA + R P D++LK GR G+ NG+G Y Y +K Sbjct: 381 MMLISGSTDYRGFERVDIVVEAVFEDLSLKQQMVADIERFGAAHTIFASNTSSLPISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIPHEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDNALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAPPSFDVILKDGRKGRKNGRGFYLYSNPTK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEPW (Fatty acid oxidation complex subunit alpha OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 75/237 (31.65%), Postives = 121/237 (51.05%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 V RG+ K L + LDY+ K D+V+EAV+E +K + +E+E+ I+ +NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + + ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FP+R ++ +D++ ++ R G+ N KG Y Y ++ KP Sbjct: 364 VKRGRSNPAKMAAVLNNITPALDYAPVKAADVVVEAVVEHPKVKSMVLAEVEEHVSEDAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGEHSSDETVASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPERMGKTGKDAIDVMFEAERFGQKNNKGFYQYSVDRRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: ECHP_RAT (Peroxisomal bifunctional enzyme OS=Rattus norvegicus GN=Ehhadh PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 78/214 (36.45%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 127 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK 735 E VD+V+EAV E + LK+K+F+EL C P L TNTS ++++ + T +IG HFFSPAHVM LLE++ + +S I +M+ NC GF NR PY L+ G +D + FG +GPF++ DLAG V T P R S SPL D+L ++GR G+ GKG Y Y+K Sbjct: 370 ELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDK 583
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: ECHA_HUMAN (Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens GN=HADHA PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.270e-31 Identity = 76/233 (32.62%), Postives = 116/233 (49.79%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V + LT + ++ L G LDY F+ DMVIEAV E + LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+ TE+TS + + GF R P ++ GVD ++DS SFG P+G L+D G VA +++ K F +R L+ ++ G G+ +GKG Y Y++G K Sbjct: 412 VKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQEGVK 644
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_VIBSL (Fatty acid oxidation complex subunit alpha OS=Vibrio splendidus (strain LGP32) GN=fadB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.166e-31 Identity = 78/237 (32.91%), Postives = 121/237 (51.05%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 ++RG+L K L + L Y+ + D+++EAV+E+ +K + SE+E +L +NTSTI +N++ + + G HFF+P H MPL+EI+R E TS + I ++ +C GF VNR FPY +L+ G D +ID + R FG P+GP LLD+ G A + FP+R + +D L + + G+ NG G YTY +K +P Sbjct: 365 LSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVGEDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAYLLDVVGLDTAHHAQAVMAQGFPERMGKEGRDAIDALYVAEKYGQKNGSGFYTYSVDKRGRP 601 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |