CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ECOUT (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain UTI89 / UPEC) GN=fadB PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.166e-31 Identity = 77/232 (33.19%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 RGK+ K + + LDY+ F VD+V+EAV+E+ +K+ + +E E+ P +LA+NTSTI ++ + + G HFF+P H MPL+EI+R E++S + I ++ +C GF VNR FPY L+ G +ID + + FG P+GP LLD+ G A FP R + +D L + R G+ NG G + Y++ SK Sbjct: 366 RGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGAGFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ECO81 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81 (strain ED1a) GN=fadB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.166e-31 Identity = 77/232 (33.19%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 RGK+ K + + LDY+ F VD+V+EAV+E+ +K+ + +E E+ P +LA+NTSTI ++ + + G HFF+P H MPL+EI+R E++S + I ++ +C GF VNR FPY L+ G +ID + + FG P+GP LLD+ G A FP R + +D L + R G+ NG G + Y++ SK Sbjct: 366 RGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGAGFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ECO45 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.166e-31 Identity = 77/232 (33.19%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 RGK+ K + + LDY+ F VD+V+EAV+E+ +K+ + +E E+ P +LA+NTSTI ++ + + G HFF+P H MPL+EI+R E++S + I ++ +C GF VNR FPY L+ G +ID + + FG P+GP LLD+ G A FP R + +D L + R G+ NG G + Y++ SK Sbjct: 366 RGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGAGFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SHEFN (Fatty acid oxidation complex subunit alpha OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadJ PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31 Identity = 75/231 (32.47%), Postives = 113/231 (48.92%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R +T +N + ++ +Y+ KD D+V+EAV E + LK K+ ++E+ C + I A+NTS++ + + S + +IG H+FSP MPL+E++ + TS + I + + GF VNR Y A L+ G + +D A+ FG P+GP LLD G V A S +K DR D LL R G+ NGKG Y Y +K Sbjct: 364 VKRRHMTPIARDNIMALMTTTTEYTGIKDADIVVEAVFEDLALKHKMVQDVERECGENTIFASNTSSLPIGQIAAAASRPENVIGLHYFSPVEKMPLVEVIAHKTTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQRIEHLDRALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGDRFKAPAAFDKLLADDRKGRKNGKGFYQYGPKAK 594
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_VIBPA (Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus GN=fadB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31 Identity = 74/237 (31.22%), Postives = 123/237 (51.90%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 + +G++ K L + L Y+ ++ D+++EAV+E+ +K + SE+E ++ +NTSTI +N++ + + G HFF+P H MPL+EI+R E+TS + I ++ +C GF VNR FPY +L+ G D ++D + R FG P+GP LLD+ G A + FP+R + +D L ++ + G+ NG G Y+Y +K KP Sbjct: 365 LAQGRIDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKATVLSEVESHVGEDTVITSNTSTIPINLLAQSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKVDKVMERKFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPERMGKQGRDAIDALFEANKYGQKNGNGFYSYTIDKKGKP 601
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_VIBHB (Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=fadB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31 Identity = 75/237 (31.65%), Postives = 123/237 (51.90%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 ++RG++ K L + L Y+ ++ D+++EAV+E+ +K + SE+E ++ +NTSTI +N++ + + G HFF+P H MPL+EI+R E TS + I ++ +C GF VNR FPY +L+ G D +ID + R FG P+GP LLD+ G A + FP+R + +D L ++ + G+ NG G Y+Y ++ KP Sbjct: 365 LSRGRIDGFKMAGILASITPSLHYTGIEESDVIVEAVVENPKVKAAVLSEVESHVGEDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKIMERKFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMGKQGRDAIDALFEASKYGQKNGSGFYSYTIDRKGKP 601
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31 Identity = 77/232 (33.19%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 RGK+ K + + LDY+ F VD+V+EAV+E+ +K+ + +E E+ +LA+NTSTI ++ + + G HFF+P H MPL+EI+R E++S + I ++ +C GF VNR FPY L+ G D +ID + + FG P+GP LLD+ G A FP R + +D L + R G+ NG G + Y++ SK Sbjct: 366 RGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHIFL (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri GN=fadB PE=3 SV=4) HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31 Identity = 77/232 (33.19%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 RGK+ K + + LDY+ F VD+V+EAV+E+ +K+ + +E E+ +LA+NTSTI ++ + + G HFF+P H MPL+EI+R E++S + I ++ +C GF VNR FPY L+ G D +ID + + FG P+GP LLD+ G A FP R + +D L + R G+ NG G + Y++ SK Sbjct: 366 RGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHIF8 (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri serotype 5b (strain 8401) GN=fadB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31 Identity = 77/232 (33.19%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 RGK+ K + + LDY+ F VD+V+EAV+E+ +K+ + +E E+ +LA+NTSTI ++ + + G HFF+P H MPL+EI+R E++S + I ++ +C GF VNR FPY L+ G D +ID + + FG P+GP LLD+ G A FP R + +D L + R G+ NG G + Y++ SK Sbjct: 366 RGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_IDILO (Fatty acid oxidation complex subunit alpha OS=Idiomarina loihiensis GN=fadB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31 Identity = 81/237 (34.18%), Postives = 118/237 (49.79%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 V RGK+ +K L + L KDVD+V+EAV+E+ +K + +E+E IL +NTSTI + + + ++ G HFF+P H MPL+EI+R E+TS + ++ +C GF VNR FPY +V GVD ID + + FG P+GP L D+ G A + + FP R +S + L + R G+ NGKG Y Y +K KP Sbjct: 364 VERGKVNNEKMIKILSSITPTLLNDAVKDVDIVVEAVVENPKVKGSVLAEIEGVIGDDAILTSNTSTISITELAKNLKRPEKFCGMHFFNPVHKMPLVEIIRGEKTSDDTVNAVVAYALKLGKTPIVVNDCPGFLVNRVLFPYLAGFAGMVDEGVDFVGIDKVMEKQFGWPMGPAYLSDVVGIDTADHCTVVMEAGFPTRMKRDESSAIAKLAAAERYGQKNGKGFYVYGTDKKGKP 600 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |