CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEFS (Fatty acid oxidation complex subunit alpha OS=Pseudomonas fluorescens (strain SBW25) GN=fadB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.121e-38 Identity = 82/233 (35.19%), Postives = 124/233 (53.22%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V +G++T K L ++ L Y +F VD+V+EAV+E+ +KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++S + + +C GF VNR FPY LVS GVD RID + FG P+GP L+D+ G + FPDR + +D L ++ R G+ NGKG Y YE K Sbjct: 365 VDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEA7 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas aeruginosa (strain PA7) GN=fadB PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.953e-38 Identity = 84/236 (35.59%), Postives = 125/236 (52.97%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 V +G+LT K AL ++ + Y +F +VD+V+EAV+E+ +KQ + +E+E A I+A+NTSTI ++++ + + G HFF+P H+MPL+E++R E+T I + +C GF VNR FPY L+ GVD RID + FG P+GP L D+ G + FPDR VD++ ++ R G+ NGKG Y YE K KP Sbjct: 365 VEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLGFGVDFVRIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEMY (Fatty acid oxidation complex subunit alpha OS=Pseudomonas mendocina (strain ymp) GN=fadB PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.186e-37 Identity = 82/236 (34.75%), Postives = 126/236 (53.39%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 V +G++T K AL ++ + Y +F +VD+V+EAV+E+ +KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++S + + +C GF VNR FPY L+ GVD RID + FG P+GP L D+ G + FPDR VD++ ++ R G+ NGKG Y YE K KP Sbjct: 365 VEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEDVVREDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSEU5 (Fatty acid oxidation complex subunit alpha OS=Pseudomonas stutzeri (strain A1501) GN=fadB PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.311e-36 Identity = 79/233 (33.91%), Postives = 121/233 (51.93%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V +G+LT +K AL ++ + Y +F +VD+V+EAV+E+ +K + +E+E I+A+NTSTI ++ + + + G HFF+P H+MPL+E++R E+TS I + +C GF VNR FPY ++ GVD R D + FG P+GP L+D+ G + FPDR VD++ + R G+ NGKG Y YE K Sbjct: 365 VEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVENPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVRADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQKNGKGFYAYEMDKK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSYCK (Fatty acid oxidation complex subunit alpha OS=Psychrobacter cryohalolentis (strain K5) GN=fadB PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.713e-36 Identity = 81/237 (34.18%), Postives = 125/237 (52.74%), Query Frame = 1 Query: 49 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYE--KGSKP 747 +V RGK+T K L ++ L+Y +F + D+VIEAV+E+ +K+ + E+E CILA+NTSTI + + E + +G HFF+P + MPL+E++R E++S + I + +C GF VNR FPY + LL+ G D +D + FG P+GP L+D+ G ++ + FPDR ++ L ++ R G+ NG G Y YE K KP Sbjct: 365 MVDRGKITPAKMGETLSRIRPTLNYGDFAETDIVIEAVVENPNVKRAVLKEVEGLVKDDCILASNTSTISITFLAEALERPENFVGMHFFNPVNRMPLVEVIRGEKSSEEAISTTVALATKMGKVPVVVNDCPGFLVNRVLFPYFGAFDLLLKQGADFAHVDKVMEKFGWPMGPAYLIDVVGLDTGVHGAEVMAEGFPDRMKPDYKGAIEHLYENKRLGQKNGVGFYKYEMDKRGKP 601
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadJ PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.815e-36 Identity = 83/234 (35.47%), Postives = 126/234 (53.85%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + AL ++ G +D+S FK D+VIEAV E + LKQ++ +++E+ C PH I A+NTS++ + + + +++IG HFFSP MPL+E++ E TSAQ + ++ + GF VNR PY A L++ G V +D A+ FG P+GP QLLD G + A+ +R F P +V +L R G+ NG+G Y Y KG K Sbjct: 360 VKRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFEDLQLKQQMVADVEQYCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHESTSAQTVATVVKLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENVDDALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSPPANVVSAILNDDRKGRKNGRGFYLYAAKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEAM (Fatty acid oxidation complex subunit alpha OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.508e-36 Identity = 82/237 (34.60%), Postives = 127/237 (53.59%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 V RG+ T DK L + LDY+ KDV++V+EAV+E+ +K + +++E I+A+NTSTI ++++ + + R G HFF+P H MPL+E++R + TS + + ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G FPDR +S +D++ ++GR G+ NGKG Y Y +K KP Sbjct: 363 VARGRSTPDKMAKVLNNITPALDYAPLKDVNVVVEAVVENPKVKAMVLADVENVVADDAIIASNTSTISIDLLAKSLKNPARFCGMHFFNPVHKMPLVEVIRGKDTSEETVASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMADGFPDRMGKSDKDAIDVMYEAGRLGQKNGKGFYQYSIDKRGKP 599
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHESM (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-4) GN=fadB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.110e-35 Identity = 80/234 (34.19%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E+ I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.110e-35 Identity = 80/234 (34.19%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E+ I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: ECHP_DANRE (Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.893e-35 Identity = 84/226 (37.17%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 91 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV-------AAATSKEFDKAFPDRSFQS----PLVDLLLKSGRNGKANGKGLYTYEK 735 +L +LK L + KDVD+VIEAV E + LK++IF EL + C P +L +NTS +D++ + + T + G HFFSPAHVM LLE+V R+S + I M+ NC GF NR PY + A L+ G +ID A+ FG +G F++ DLAG V + T + D P R Q P+ D++ + GR G+ G+G Y Y+K Sbjct: 354 SLNLLKFSLSLQDLKDVDLVIEAVFEDMALKKQIFRELSRVCRPATLLCSNTSGLDVDALADVTDRPQLVAGMHFFSPAHVMKLLEVVCGPRSSKEAIATAMSLGKRMGKVSVAVGNCPGFVGNRMLMPYLEQATFLLEEGATPQQIDKALEDFGFAMGVFRMSDLAGLDVGWRVRKESGLTGPDVDPKDPPRRRQGRKYCPIPDMVCQQGRFGQKTGRGWYMYDK 579 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |