CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEWM (Fatty acid oxidation complex subunit alpha OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.473e-35 Identity = 80/237 (33.76%), Postives = 123/237 (51.90%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ--SPLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 + RG+ T +K L + LDY+ KDVD+V+EAV+E +K + +E+E+ I+ +NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR + +D++ S R G+ N KG Y Y ++ KP Sbjct: 364 IKRGRSTPEKMAKVLNNITATLDYAPVKDVDVVVEAVVEHPKVKSMVLAEVEQNVSDDAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYLLDVVGIDTGHHAQAVMAEGFPDRMGKDGKDAIDIMFDSERFGQKNNKGFYAYSVDRRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEB5 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.230e-35 Identity = 81/234 (34.62%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E I+A+NTSTI +N++ + +R G HFF+P H MPL+EI+R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_PSYWF (Fatty acid oxidation complex subunit alpha OS=Psychrobacter sp. (strain PRwf-1) GN=fadB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.230e-35 Identity = 77/234 (32.91%), Postives = 121/234 (51.71%), Query Frame = 1 Query: 49 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 +V R K+T + L ++ L+Y +F + D+VIEAV+E+ +K + E+E + ILA+NTSTI + + + +G HFF+P H MPL+E++R E++S + I + +C GF VNR FPY + LL+ G D +D + FG P+GP L+D+ G ++ + FPDR + L ++ R G+ NG G Y YEK S+ Sbjct: 365 MVERKKMTPAQMGETLSRIRPTLNYGDFGETDIVIEAVVENPKVKHAVLKEVEGLVKDNAILASNTSTISITYLATVLERPENFVGMHFFNPVHRMPLVEVIRGEKSSEEAIATTVALAQRMGKVPVVVNDCPGFLVNRVLFPYFGAFDLLLKQGADFVHVDKVMEKFGWPMGPAYLIDVVGLDTGVHGAEVMAEGFPDRMKPDYKGAIKHLFENNRLGQKNGVGFYKYEKDSR 598
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_KLEP3 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadJ PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 85/234 (36.32%), Postives = 121/234 (51.71%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE-KGSK 744 V + +L + + + M+ G DY F D+VIEAV E + LKQ++ SE+E+ C P I A+NTS++ + + + R+IG HFFSP MPL+E++ + T Q I ++ + GF VNR PY A L+ G V ID A+ FG P+GP QLLD G + AF +R F SP ++D +LK R G+ N +G Y YE KG K Sbjct: 360 VRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSSPANIIDAILKDDRKGRKNNRGFYLYETKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHESW (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain W3-18-1) GN=fadB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 80/234 (34.19%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKIKAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHESR (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-7) GN=fadB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 79/234 (33.76%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ D+V+EAV+E +K ++ +E+E+ I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPALDYAPVNHADVVVEAVVEHPKVKAQVLAEVEQYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHESH (Fatty acid oxidation complex subunit alpha OS=Shewanella sediminis (strain HAW-EB3) GN=fadB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 79/237 (33.33%), Postives = 124/237 (52.32%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 + RG+ T K L + LDY+ KDVD+V+EAV+E +K + +E+E+ I+ +NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR ++ +D++ ++ R G+ N KG Y Y ++ KP Sbjct: 364 IKRGRSTPQKMAKVLNNITATLDYTPVKDVDVVVEAVVEHPKVKSMVLAEVEQNVSDDAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYLLDVVGIDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFEAERFGQKNSKGFYAYSVDRRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEPC (Fatty acid oxidation complex subunit alpha OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 80/234 (34.19%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKIKAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEB9 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS195) GN=fadB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 80/234 (34.19%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 80/234 (34.19%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSR 597 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |