CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEB2 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS223) GN=fadB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35 Identity = 80/234 (34.19%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + LDY+ K D+V+EAV+E +K ++ +E+E I+A+NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ACIBS (Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain SDF) GN=fadB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.397e-35 Identity = 79/233 (33.91%), Postives = 123/233 (52.79%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R K+ + L ++ L Y EFK+VD+VIEAV E+ +K+ + +E EK + I+A+NTSTI + + + + +G HFF+P H+MPL+E++R E+TS + I + +C GF VNR FPY + LLV G D +ID+ + FG P+GP L+D+ G ++ + FPDR ++ + ++ R G+ N G Y YE K Sbjct: 366 VERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIEAMYEAKRLGQKNDVGFYKYELDKK 598
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ACIBC (Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain ACICU) GN=fadB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.397e-35 Identity = 79/233 (33.91%), Postives = 123/233 (52.79%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R K+ + L ++ L Y EFK+VD+VIEAV E+ +K+ + +E EK + I+A+NTSTI + + + + +G HFF+P H+MPL+E++R E+TS + I + +C GF VNR FPY + LLV G D +ID+ + FG P+GP L+D+ G ++ + FPDR ++ + ++ R G+ N G Y YE K Sbjct: 366 VERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIEAMYEAKRLGQKNDVGFYKYELDKK 598
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.227e-34 Identity = 78/234 (33.33%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V RG+ T +K L + L+Y+ K D+V+EAV+E +K ++ +E+E+ I+A+NTSTI ++++ + +R G HFF+P H MPL+E++R E +S + I ++ +C GF VNR FPY L++ G D ID + + FG P+GP LLD+ G + FPDR +S +D++ ++ R G+ NGKG Y Y S+ Sbjct: 364 VARGRSTPEKMAKVLNNITPALEYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSEDAIIASNTSTISISLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSR 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ACIBY (Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain AYE) GN=fadB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.227e-34 Identity = 79/233 (33.91%), Postives = 123/233 (52.79%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R K+ + L ++ L Y EFK+VD+VIEAV E+ +K+ + +E EK + I+A+NTSTI + + + + +G HFF+P H+MPL+E++R E+TS + I + +C GF VNR FPY + LLV G D +ID+ + FG P+GP L+D+ G ++ + FPDR ++ + ++ R G+ N G Y YE K Sbjct: 366 VERKKMKPVQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIEAMYEAKRLGQKNDVGFYKYELDKK 598
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ACIB5 (Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain AB0057) GN=fadB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.227e-34 Identity = 79/233 (33.91%), Postives = 123/233 (52.79%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R K+ + L ++ L Y EFK+VD+VIEAV E+ +K+ + +E EK + I+A+NTSTI + + + + +G HFF+P H+MPL+E++R E+TS + I + +C GF VNR FPY + LLV G D +ID+ + FG P+GP L+D+ G ++ + FPDR ++ + ++ R G+ N G Y YE K Sbjct: 366 VERKKMKPVQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIEAMYEAKRLGQKNDVGFYKYELDKK 598
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ACIB3 (Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain AB307-0294) GN=fadB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.227e-34 Identity = 79/233 (33.91%), Postives = 123/233 (52.79%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R K+ + L ++ L Y EFK+VD+VIEAV E+ +K+ + +E EK + I+A+NTSTI + + + + +G HFF+P H+MPL+E++R E+TS + I + +C GF VNR FPY + LLV G D +ID+ + FG P+GP L+D+ G ++ + FPDR ++ + ++ R G+ N G Y YE K Sbjct: 366 VERKKMKPVQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIEAMYEAKRLGQKNDVGFYKYELDKK 598
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ACIAD (Fatty acid oxidation complex subunit alpha OS=Acinetobacter sp. (strain ADP1) GN=fadB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.227e-34 Identity = 78/233 (33.48%), Postives = 121/233 (51.93%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R KLT K L ++ L Y EFK+VD+VIEAV E+ +K+ + ++ E + I+A+NTSTI + + + + +G HFF+P H+MPL+E++R E+TS + + + +C GF VNR FPY + LL+ G D +ID + FG P+GP L+D+ G ++ + FPDR + + ++ R G+ N G Y YE K Sbjct: 366 VERKKLTPAKMGETLARIRPTLSYDEFKEVDIVIEAVTENPKIKEAVLADTEAKVRDNTIIASNTSTISITRLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEQTSEEAVATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQIDKVMEKFGWPMGPAYLMDVVGIDTGVHGAEVMAEGFPDRMKPDYKGSIQTMYEAKRLGQKNDVGFYKYELDKK 598
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALDC (Fatty acid oxidation complex subunit alpha OS=Salmonella dublin (strain CT_02021853) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.093e-34 Identity = 83/234 (35.47%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + ++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALG2 (Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.734e-34 Identity = 83/234 (35.47%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + ++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINKAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |