CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALEP (Fatty acid oxidation complex subunit alpha OS=Salmonella enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.734e-34 Identity = 83/234 (35.47%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + ++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_PECCP (Fatty acid oxidation complex subunit alpha OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.734e-34 Identity = 77/228 (33.77%), Postives = 114/228 (50.00%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 735 V R ++ + + ++ G DY F+ D+VIEAV E + LK+++ +E+E PH I A+NTS++ ++ + E ++IG H+FSP MPL+E++ TSA+ + + + GF VNR PY A + G + ID A+ FG P+GPF LLD G VA + R P D +LK GR G+ NGKG Y Y K Sbjct: 370 VQRKRMKPTERQRLMTLISGSTDYRGFEHADIVIEAVFEDLALKRQMVAEIEDHAAPHTIFASNTSSLPIHQIAEGARRPQQVIGLHYFSPVDKMPLVEVIPHAHTSAETVATTVALARKQGKTAIVVGDSAGFYVNRILAPYINEAAYCLLEGEPIESIDYALVRFGFPVGPFALLDEVGIDVATKIVPVLSEELGTRFTSPPAFDAILKDGRKGRKNGKGFYRYNK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_SHELP (Fatty acid oxidation complex subunit alpha OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadB PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.734e-34 Identity = 77/237 (32.49%), Postives = 121/237 (51.05%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ--SPLVDLLLKSGRNGKANGKGLYTY--EKGSKP 747 + RG+ T K L + LDY+ K D+V+EAV+E +K + +E+E+ I+ +NTSTI +N++ + +R G HFF+P H MPL+E++R E +S + + ++ +C GF VNR FPY L+ G D ID + + FG P+GP LLD+ G + FPDR + +D++ ++ R G+ NGKG Y Y ++ KP Sbjct: 364 INRGRSTPAKMAGVLNNITATLDYNALKQADVVVEAVVEHPKVKATVLAEVEQVVGEDAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETVASVVAYAAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDVMFEADRFGQKNGKGFYQYSVDRRGKP 600
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALTY (Fatty acid oxidation complex subunit alpha OS=Salmonella typhimurium GN=fadJ PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 83/234 (35.47%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALTI (Fatty acid oxidation complex subunit alpha OS=Salmonella typhi GN=fadJ PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 83/234 (35.47%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALSV (Fatty acid oxidation complex subunit alpha OS=Salmonella schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 83/234 (35.47%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALPK (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A (strain AKU_12601) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 83/234 (35.47%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALPB (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 83/234 (35.47%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALPA (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A GN=fadJ PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 83/234 (35.47%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SALNS (Fatty acid oxidation complex subunit alpha OS=Salmonella newport (strain SL254) GN=fadJ PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34 Identity = 83/234 (35.47%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y EKG K Sbjct: 360 VRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRK 592 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |