CB293316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLU (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 82/234 (35.04%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLC (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 82/234 (35.04%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECOHS (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O9:H4 (strain HS) GN=fadJ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 82/234 (35.04%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECO81 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81 (strain ED1a) GN=fadJ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 81/234 (34.62%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECO7I (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 81/234 (34.62%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECO24 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 82/234 (35.04%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.315e-33 Identity = 83/234 (35.47%), Postives = 122/234 (52.14%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R + + + L ++ G DY F D+VIEAV E + LKQ++ +E+E+ C PH I A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + GF VNR PY A L++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y KG K Sbjct: 360 VRRRHIKAGERDKQLALISGSTDYRGFSHRDLVIEAVFEDLALKQQMVAEVEQNCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHATTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRLLTEGERVEAIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGVKGRK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADB_ERWCT (Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora subsp. atroseptica GN=fadB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.023e-33 Identity = 82/232 (35.34%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 58 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYEKGSK 744 RGKL K L + LDY+ F+ D+V+EAV+E+ +K + +E E ILA+NTSTI + ++ G HFF+P H MPL+EI+R +TS I ++ +C GF VNR FPY + LL+ G D ID+A+ + FG P+GP LLD+ G A + FP R + +D+L + R G+ NG+G Y Y+ SK Sbjct: 366 RGKLDGMKMATILANIHPTLDYAGFERTDIVVEAVVENPKIKASVLAETESHISESTILASNTSTIPIAVLAAALKRPQNFCGMHFFNPVHRMPLVEIIRGPKTSDSTIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFREIDNAMEKKFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGQGFYRYQTDSK 597
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_SHELP (Fatty acid oxidation complex subunit alpha OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.948e-33 Identity = 78/231 (33.77%), Postives = 113/231 (48.92%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 744 V R +T +N + ++ +Y KD DMV+EAV E + LK ++ ++E+ C H I A+NTS++ + + E + +IG H+FSP MPL+E++ ++TS Q I + + GF VNR Y A L+ G V +D A+ FG P+GP LLD G V A S +K +R D LL R G+ NGKG Y Y SK Sbjct: 362 VKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFEDLNLKHQMVKDVERECGEHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEVIAHDKTSPQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLADDRKGRKNGKGFYQYGAKSK 592
BLAST of CB293316 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL6 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6 GN=fadJ PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.948e-33 Identity = 82/234 (35.04%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 52 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSK 744 V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRK 592 The following BLAST results are available for this feature:
BLAST of CB293316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293316 ID=CB293316; Name=CB293316; organism=Citrus sinensis; type=EST; length=749bpback to top |