CB293322

Overview
NameCB293322
Unique NameCB293322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CML10_ARATH (Calmodulin-like protein 10 OS=Arabidopsis thaliana GN=CML10 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.603e-46
Identity = 96/149 (64.43%), Postives = 120/149 (80.54%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MA++ T  QISEF+E FS++DK+GDG ITT+E G VMRSLG N T+AELQ+ IN+ D DG+GTI+F EFL  MA   KDT SE++LK+ FR+FD D+NGFISAAE+R+V T L  K TDEE+DE+I+ ADVDGDGQINY EF ++MMAK
Sbjct:    1 MANKFTRQQISEFREQFSVYDKNGDGHITTEEFGAVMRSLGLNLTQAELQEEINDSDLDGDGTINFTEFLCAMA---KDTYSEKDLKKDFRLFDIDKNGFISAAEMRYVRTILRWKQTDEEIDEIIKAADVDGDGQINYREFARLMMAK 146          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_YEAST (Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 9.890e-46
Identity = 87/146 (59.59%), Postives = 120/146 (82.19%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            M+  LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE+D DGN  I+F EFL LM+R++K  DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVD+M+RE   DG G+IN ++F  ++
Sbjct:    1 MSSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 145          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_KLULA (Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.203e-45
Identity = 88/146 (60.27%), Postives = 118/146 (80.82%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            M+  LT++QI+EFKEAF+LFDKD  G I+  EL TVMRSLG +P+EAE+ D++NE+D DGN  I+F EFL LM+R++K  DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVDEM+RE   DG G+IN ++F  ++
Sbjct:    1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CML6_ORYSJ (Putative calmodulin-like protein 6 OS=Oryza sativa subsp. japonica GN=CML6 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 83/151 (54.97%), Postives = 116/151 (76.82%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 456
            M   L + QIS+F++AFSLFDK+ DGCI+ +EL TV+  LG  P++ +LQDMI  VD DGNGTI+F EFL +M +K+ +    D EEEL++AFR+FDKD NGFIS  EL  VM +LGE++T++E+D+M++ AD + DGQ++YEEF +VMM+
Sbjct:    1 MESHLNEQQISDFRDAFSLFDKNNDGCISREELATVLTRLGMAPSQEDLQDMIVAVDEDGNGTIEFDEFLAIMKKKLYENDKGDDEEELRKAFRIFDKDDNGFISRNELSMVMASLGEEMTEDEIDDMMKAADSNNDGQVDYEEFKRVMMS 151          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CML12_ARATH (Calmodulin-like protein 12 OS=Arabidopsis thaliana GN=CML12 PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 2.280e-42
Identity = 95/166 (57.23%), Postives = 116/166 (69.88%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA---------RKMKDT--------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MAD+LTDDQI+E++E+F LFDK+GDG IT KEL TVM SLG+N T+A+LQDM+NEVD DG+GTIDFPEFL LMA         R  K T        D   E +EAFRVFDK+ +G+I+  ELR  M +LGE  T  E+ +MI EAD DGDG I++ EFV VM  K
Sbjct:   90 MADKLTDDQITEYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPRHTKKTMVDYQLTDDQILEFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQDMINEADADGDGTISFSEFVCVMTGK 255          

HSP 2 Score: 163.696 bits (413), Expect = 1.059e-39
Identity = 83/162 (51.23%), Postives = 117/162 (72.22%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM---------------KDTDSE-EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            MAD+LTDDQI+E++E+F LFDK+GDG IT KELGT+MRS+G+ PT+A+LQD++NE D DG+GTIDFPEFL +MA+                 K TD +  E +E+FR+FDK+ +G I+  ELR VM +LG+  T  ++ +M+ E D+DGDG I++ EF+ +M
Sbjct:    1 MADKLTDDQITEYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGTIDFPEFLCVMAKNQGHDQAPRHTKKTMADKLTDDQITEYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLM 162          

HSP 3 Score: 113.62 bits (283), Expect = 1.257e-24
Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 1
Query:   22 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQ 303
            QLTDDQI EF+EAF +FDK+GDG IT  EL T MRSLG+  T+AELQDMINE DADG+GTI F EF+ +M  KM DT S+   KE +RV ++ Q
Sbjct:  183 QLTDDQILEFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQDMINEADADGDGTISFSEFVCVMTGKMIDTQSK---KETYRVVNQGQ 273          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: TNNC2_RANES (Troponin C, skeletal muscle OS=Rana esculenta PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.807e-39
Identity = 77/145 (53.10%), Postives = 111/145 (76.55%), Query Frame = 1
Query:   25 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQ PT+ EL  +I EVD DG+GTIDF EFL +M R+MK+     SEEEL E FR+FDK+ +G+I + EL  ++ + GE +TDEE++E++++ D + DG+I+++EF+K+M
Sbjct:   14 LSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAQGKSEEELAECFRIFDKNADGYIDSEELGEILRSSGESITDEEIEELMKDGDKNNDGKIDFDEFLKMM 158          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: TNNC2_MELGA (Troponin C, skeletal muscle OS=Meleagris gallopavo GN=TNNC2 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.529e-38
Identity = 76/145 (52.41%), Postives = 110/145 (75.86%), Query Frame = 1
Query:   25 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL  +I EVD DG+GTIDF EFL +M R+MK+     SEEEL   FR+FDK+ +GFI   EL  ++   GE +T+EE++++++++D + DG+I+++EF+K+M
Sbjct:   14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEEIEDLMKDSDKNNDGRIDFDEFLKMM 158          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: TNNC2_CHICK (Troponin C, skeletal muscle OS=Gallus gallus GN=TNNC2 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 3.407e-38
Identity = 75/145 (51.72%), Postives = 110/145 (75.86%), Query Frame = 1
Query:   25 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL  +I EVD DG+GTIDF EFL +M R+MK+     SEEEL   FR+FDK+ +GFI   EL  ++   GE +T+E+++++++++D + DG+I+++EF+K+M
Sbjct:   15 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 159          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CATR_SPESI (Caltractin (Fragment) OS=Spermatozopsis similis PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.450e-38
Identity = 78/142 (54.93%), Postives = 99/142 (69.72%), Query Frame = 1
Query:   25 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            LT++Q  E +EAF LFD DG G I  KEL   M +LG  P + E+Q MI+++D DG+GTIDF EFL +M  KM + DS EE+ +AFR+FD DQ G I+   L+ V   LGE LTDEE+ EMI EAD DGDG+IN EEF ++M
Sbjct:    1 LTEEQKQEXREAFDLFDTDGSGTIDAKELKVXMXALGFEPKKEEIQKMISDIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDQTGKITFKNLKRVAKELGENLTDEEIQEMIDEADRDGDGEINEEEFFRIM 142          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: TNNC2_RABIT (Troponin C, skeletal muscle OS=Oryctolagus cuniculus GN=TNNC2 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37
Identity = 75/145 (51.72%), Postives = 107/145 (73.79%), Query Frame = 1
Query:   25 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL  +I EVD DG+GTIDF EFL +M R+MK+     SEEEL E FR+FD++ +G+I A EL  +    GE +TDEE++ ++++ D + DG+I+++EF+K+M
Sbjct:   12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156          
The following BLAST results are available for this feature:
BLAST of CB293322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CML10_ARATH2.603e-4664.43Calmodulin-like protein 10 OS=Arabidopsis thaliana... [more]
CALM_YEAST9.890e-4659.59Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=... [more]
CALM_KLULA2.203e-4560.27Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV... [more]
CML6_ORYSJ3.518e-4354.97Putative calmodulin-like protein 6 OS=Oryza sativa... [more]
CML12_ARATH2.280e-4257.23Calmodulin-like protein 12 OS=Arabidopsis thaliana... [more]
TNNC2_RANES1.807e-3953.10Troponin C, skeletal muscle OS=Rana esculenta PE=1... [more]
TNNC2_MELGA1.529e-3852.41Troponin C, skeletal muscle OS=Meleagris gallopavo... [more]
TNNC2_CHICK3.407e-3851.72Troponin C, skeletal muscle OS=Gallus gallus GN=TN... [more]
CATR_SPESI4.450e-3854.93Caltractin (Fragment) OS=Spermatozopsis similis PE... [more]
TNNC2_RABIT1.295e-3751.72Troponin C, skeletal muscle OS=Oryctolagus cunicul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dg01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dg01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293322 ID=CB293322; Name=CB293322; organism=Citrus sinensis; type=EST; length=789bp
GCCCGTGGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAGTT
CAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCA
CCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAG
GCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAAC
TATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATA
CCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGAT
CAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCT
AGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTG
ATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATG
ATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACT
AAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATA
GTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGC
CTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGACT
CGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTTCTATGAA
TGTTGTTGTCTGTTTAATGTGTTTCATTAATTTCTGCCCTTGCGATGTTT
ATTTTTCTTTTGGTCGAAATATGTATCCTATTTTATGTA
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