CB293322

Overview
NameCB293322
Unique NameCB293322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CML33_ARATH (Probable calcium-binding protein CML33 OS=Arabidopsis thaliana GN=CML33 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 47/127 (37.01%), Postives = 75/127 (59.06%), Query Frame = 1
Query:   55 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT--DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 429
            + F  FD   DG I+ +E    + +L  +    +L +M  ++D +G+G +D  +F + M +  + +  D E+ELK+AF+++D + +G ISA EL  VMT LGEK T E    M++  DVDGDG I +
Sbjct:    8 DIFERFDTSKDGKISWEEFRDAIHALSPSIPSEKLVEMFIQLDTNGDGQVDAAKFASCMDQTAQSSGGDVEKELKDAFKLYDINCDGKISANELHVVMTRLGEKCTVESCVGMVQAIDVDGDGYIRF 134          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.393e-15
Identity = 46/151 (30.46%), Postives = 88/151 (58.28%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-----TDEEVDEMIREADVDGDGQINYEEFVKVM 450
            +AD L +++I+   + F   D D +G +T +EL   ++ +GQ   + +++ +++  D DGNG +   EF+ L    +K    +E L+EAF+ FDK+ NGFI   EL+  + +  +KL      D+ + ++  + D++ DG+I+++EF  +M
Sbjct:  360 VADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIH-LKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCD--DKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMM 507          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAF7 (Calcium-dependent protein kinase 3 OS=Plasmodium falciparum (isolate 3D7) GN=CPK3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 53/155 (34.19%), Postives = 90/155 (58.06%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVD---EMIREADVDGDGQINYEEFVKVMMAK 459
            +A Q  D  + + K  F + D+DG G IT ++L   +   G   P   +L  +++++D+DG+G ID+ EF+   A   +   S++ +  AFRVFD D +G I+ AEL H++ N  +K  +T  +V+    MIR+ D + DG+I++ EF ++M  K
Sbjct:  411 IAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMKLK 561          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = 1
Query:    1 ARGKMADQLTDD------QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 444
            A  ++ D L DD      +I   K+ F   DKD  G I   E  ++   +  NP    + ++ +E   D +G +DF EF+  ++      +++ +L+ AFR++D D++G+IS  EL  V+     TNL ++   + VD  I E DVDGDG++++EEF K
Sbjct:    4 APSRIVDNLLDDTNFDRAEIERLKKRFMKLDKDSSGSIDKTEFMSIP-GVSANPLAKRIIEVFDE---DNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLEDEQLQQIVDRTIMENDVDGDGKLSFEEFKK 158          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 1
Query:   28 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            T  +I +  + F   DKDG+G I+  E   ++  L  NP    ++ +I+  D +G+G+++F EF+  ++      D + +L+ AF+V+D D +G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF K +
Sbjct:   23 TQKEIKKLYKRFKKLDKDGNGTISKDEF-LMIPELAVNPL---VKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIVDKTILEADEDGDGKISFEEFAKTL 164          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: MLRA_HUMAN (Myosin regulatory light chain 2, atrial isoform OS=Homo sapiens GN=MYL7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   37 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            QI EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV++M     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKADLRETYSQLGKVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYII 167          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: LPS1B_LYTPI (Calcium-binding protein LPS1-beta (Fragment) OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 54/150 (36.00%), Postives = 81/150 (54.00%), Query Frame = 1
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            M  ++ D    EFK+ +   D + DG ++  EL  +M     +  E E Q +I  VD + +G + F EFL  M    K+   S +E+K+ F   DKD NG IS  EL   +  +  KL +   +++I+EAD DGDG +N EEFV  ++AK
Sbjct:   12 MPKEVIDAMKQEFKDNY---DTNKDGTVSCAELAKLM-----DCPEEEAQRIITGVDVNCDGRMQFDEFLLYMEGYTKERLYSSDEIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAK 153          

HSP 2 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = 1
Query:   46 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV-FDKDQNGFISAAELRHVMT-NLGEKLTDEEVDEMIREADVDGDGQINYEEFV 441
            E K+ F   DKDG+G I+  EL   +  +     E     +I E D DG+G ++  EF++ +  K+         K+ F   FDK+ +G ++ AE+  ++  NL  + ++E ++EMI   D++GDG++ + EF+
Sbjct:   89 EIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAKLPLC-----FKKCFHEDFDKNGDGSLTNAEMSQLLNRNLPGQYSEELINEMISRVDLNGDGRVQFGEFL 217          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 50/146 (34.25%), Postives = 82/146 (56.16%), Query Frame = 1
Query:   28 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            ++++I   ++ F   D +  G I   E  ++  S+  NP  + L    + VD DG G +DF EF+N ++      + EE+LK AF+++D D++G+IS  EL  V+     TNL E    + VD+ I E D D DG+I++EEF  ++
Sbjct:   19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIV 160          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: MLRA_MOUSE (Myosin regulatory light chain 2, atrial isoform OS=Mus musculus GN=Myl7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   37 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            QI EFKEAFS  D++ DG I   +L      LG+ +  E EL  M+ E    G G I+F  FL L   K+  TD EE +  AFR+FD    G ++  E + ++    +K +  EV+++     +D  G I+Y+    ++
Sbjct:   33 QIQEFKEAFSCIDQNRDGIICKSDLKETYSQLGRVSVPEEELDAMLQE----GKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGQGVVNKEEFKQLLMTQADKFSPAEVEQLFALTPMDLAGNIDYKSLCYII 167          
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: MLRA_CHICK (Myosin regulatory light chain 2A, cardiac muscle isoform OS=Gallus gallus PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 1
Query:   37 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 450
            QI EFKEAF++ D++ DG I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G  SA     +MT  G + + EE+D+M      D  G ++Y+  V V+
Sbjct:   25 QIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGLKSAYIKEMLMTQEG-RFSQEEIDQMFAAFPPDVSGNLDYKNLVHVI 158          
The following BLAST results are available for this feature:
BLAST of CB293322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CML33_ARATH1.067e-1537.01Probable calcium-binding protein CML33 OS=Arabidop... [more]
CDPKO_ARATH1.393e-1530.46Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPK3_PLAF71.819e-1534.19Calcium-dependent protein kinase 3 OS=Plasmodium f... [more]
CANB_KLULA1.819e-1532.70Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
CANB1_NAEGR1.819e-1534.25Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
MLRA_HUMAN2.376e-1534.53Myosin regulatory light chain 2, atrial isoform OS... [more]
LPS1B_LYTPI2.376e-1536.00Calcium-binding protein LPS1-beta (Fragment) OS=Ly... [more]
CANB_SCHPO2.376e-1534.25Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
MLRA_MOUSE3.103e-1533.81Myosin regulatory light chain 2, atrial isoform OS... [more]
MLRA_CHICK3.103e-1535.97Myosin regulatory light chain 2A, cardiac muscle i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dg01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dg01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293322 ID=CB293322; Name=CB293322; organism=Citrus sinensis; type=EST; length=789bp
GCCCGTGGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAGTT
CAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCA
CCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAG
GCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAAC
TATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATA
CCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGAT
CAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCT
AGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTG
ATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATG
ATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACT
AAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATA
GTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGC
CTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGACT
CGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTTCTATGAA
TGTTGTTGTCTGTTTAATGTGTTTCATTAATTTCTGCCCTTGCGATGTTT
ATTTTTCTTTTGGTCGAAATATGTATCCTATTTTATGTA
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