CB293322

Overview
NameCB293322
Unique NameCB293322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_MOUSE (Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_HUMAN (Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_GECJA (Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_DANRE (Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_CTEID (Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_CHICK (Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_BOVIN (Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_ANAPL (Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM2_BRALA (Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 PE=2 SV=3)

HSP 1 Score: 275.018 bits (702), Expect = 3.262e-73
Identity = 133/149 (89.26%), Postives = 145/149 (97.32%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEM+READ+DGDGQ+NYEEFV++M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMVREADIDGDGQVNYEEFVEMMTSK 149
[Close]
BLAST of CB293322 vs. ExPASy Swiss-Prot
Match: CALM_LOCMI (Calmodulin OS=Locusta migratoria PE=1 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 4.260e-73
Identity = 134/149 (89.93%), Postives = 144/149 (96.64%), Query Frame = 1 
Query:   13 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 459
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
The following BLAST results are available for this feature:
BLAST of CB293322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CALM_MOUSE2.498e-7389.93Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2[more]
CALM_HUMAN2.498e-7389.93Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2[more]
CALM_GECJA2.498e-7389.93Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV... [more]
CALM_DANRE2.498e-7389.93Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3[more]
CALM_CTEID2.498e-7389.93Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2... [more]
CALM_CHICK2.498e-7389.93Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2[more]
CALM_BOVIN2.498e-7389.93Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2[more]
CALM_ANAPL2.498e-7389.93Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2[more]
CALM2_BRALA3.262e-7389.26Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 ... [more]
CALM_LOCMI4.260e-7389.93Calmodulin OS=Locusta migratoria PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dg01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dg01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293322 ID=CB293322; Name=CB293322; organism=Citrus sinensis; type=EST; length=789bp
GCCCGTGGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAGTT
CAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCA
CCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAG
GCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAAC
TATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATA
CCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGAT
CAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCT
AGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTG
ATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATG
ATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACT
AAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATA
GTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGC
CTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGACT
CGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCTGTTCTATGAA
TGTTGTTGTCTGTTTAATGTGTTTCATTAATTTCTGCCCTTGCGATGTTT
ATTTTTCTTTTGGTCGAAATATGTATCCTATTTTATGTA
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